Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DRAP01903 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRAP01903 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRAP01903 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRAP01903 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DRAP01903 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRAP01903 AL118508.1-201ENST00000613502 2345 ntBASIC17.92■□□□□ 0.46
HLA-DRAP01903 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DRAP01903 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRAP01903 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRAP01903 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRAP01903 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DRAP01903 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRAP01903 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.92■□□□□ 0.46
HLA-DRAP01903 AC002347.1-201ENST00000569543 541 ntBASIC17.92■□□□□ 0.46
HLA-DRAP01903 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DRAP01903 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRAP01903 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DRAP01903 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRAP01903 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DRAP01903 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DRAP01903 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DRAP01903 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DRAP01903 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DRAP01903 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DRAP01903 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DRAP01903 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DRAP01903 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DRAP01903 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DRAP01903 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DRAP01903 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DRAP01903 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DRAP01903 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DRAP01903 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DRAP01903 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DRAP01903 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DRAP01903 AC005052.1-201ENST00000625181 2492 ntBASIC17.91■□□□□ 0.46
HLA-DRAP01903 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DRAP01903 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 AC092474.2-201ENST00000424288 719 ntBASIC17.9■□□□□ 0.46
HLA-DRAP01903 AC004832.2-201ENST00000426397 482 ntBASIC17.9■□□□□ 0.46
HLA-DRAP01903 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DRAP01903 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DRAP01903 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-DRAP01903 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-DRAP01903 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-DRAP01903 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms