Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-AP01891 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-AP01891 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-AP01891 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-AP01891 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-AP01891 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-AP01891 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-AP01891 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-AP01891 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-AP01891 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-AP01891 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-AP01891 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-AP01891 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-AP01891 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-AP01891 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-AP01891 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.16□□□□□ -0.14
HLA-AP01891 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 AK4P3-201ENST00000418260 669 ntBASIC14.16□□□□□ -0.14
HLA-AP01891 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 AC104076.2-201ENST00000448912 469 ntBASIC14.16□□□□□ -0.14
HLA-AP01891 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.16□□□□□ -0.14
HLA-AP01891 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-AP01891 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-AP01891 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.16□□□□□ -0.14
HLA-AP01891 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
HLA-AP01891 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-AP01891 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-AP01891 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-AP01891 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-AP01891 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-AP01891 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-AP01891 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HLA-AP01891 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-AP01891 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-AP01891 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-AP01891 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-AP01891 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HLA-AP01891 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-AP01891 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-AP01891 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-AP01891 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HLA-AP01891 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-AP01891 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HLA-AP01891 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.15□□□□□ -0.14
HLA-AP01891 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-AP01891 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HLA-AP01891 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.15□□□□□ -0.14
HLA-AP01891 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
HLA-AP01891 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.15□□□□□ -0.14
HLA-AP01891 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-AP01891 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HLA-AP01891 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HLA-AP01891 AL031432.5-201ENST00000641059 760 ntBASIC14.15□□□□□ -0.14
HLA-AP01891 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-AP01891 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HLA-AP01891 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
HLA-AP01891 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HLA-AP01891 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HLA-AP01891 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-AP01891 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HLA-AP01891 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms