Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ABCA1O95477 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCA1O95477 HYMAI-201ENST00000635591 3347 ntBASIC14.03□□□□□ -0.16
ABCA1O95477 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ABCA1O95477 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCA1O95477 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ABCA1O95477 PKD1P1-201ENST00000458669 6805 ntBASIC14.02□□□□□ -0.16
ABCA1O95477 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ABCA1O95477 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.02□□□□□ -0.16
ABCA1O95477 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ABCA1O95477 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ABCA1O95477 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ABCA1O95477 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.02□□□□□ -0.16
ABCA1O95477 HLA-V-201ENST00000429037 534 ntBASIC14.02□□□□□ -0.16
ABCA1O95477 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.02□□□□□ -0.16
ABCA1O95477 AC079140.1-201ENST00000508039 487 ntBASIC14.02□□□□□ -0.16
ABCA1O95477 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ABCA1O95477 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ABCA1O95477 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.02□□□□□ -0.16
ABCA1O95477 AC046185.3-201ENST00000623228 1824 ntBASIC14.02□□□□□ -0.16
ABCA1O95477 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.02□□□□□ -0.17
ABCA1O95477 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.02□□□□□ -0.17
ABCA1O95477 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ABCA1O95477 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
ABCA1O95477 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ABCA1O95477 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.02□□□□□ -0.17
ABCA1O95477 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ABCA1O95477 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.02□□□□□ -0.17
ABCA1O95477 PIN1P1-201ENST00000412108 996 ntBASIC14.02□□□□□ -0.17
ABCA1O95477 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.02□□□□□ -0.17
ABCA1O95477 RBPMS2P1-201ENST00000437762 623 ntBASIC14.02□□□□□ -0.17
ABCA1O95477 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.02□□□□□ -0.17
ABCA1O95477 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ABCA1O95477 AL590560.3-201ENST00000623350 461 ntBASIC14.02□□□□□ -0.17
ABCA1O95477 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.02□□□□□ -0.17
ABCA1O95477 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.02□□□□□ -0.17
ABCA1O95477 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCA1O95477 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.01□□□□□ -0.17
ABCA1O95477 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.01□□□□□ -0.17
ABCA1O95477 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ABCA1O95477 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 GK-202ENST00000378941 458 ntTSL 3 BASIC14.01□□□□□ -0.17
ABCA1O95477 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.01□□□□□ -0.17
ABCA1O95477 TSSK5P-201ENST00000423978 907 ntBASIC14.01□□□□□ -0.17
ABCA1O95477 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.01□□□□□ -0.17
ABCA1O95477 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 AC084121.4-201ENST00000641598 221 ntBASIC14.01□□□□□ -0.17
ABCA1O95477 AF228730.8-201ENST00000642140 221 ntBASIC14.01□□□□□ -0.17
ABCA1O95477 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.01□□□□□ -0.17
ABCA1O95477 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ABCA1O95477 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ABCA1O95477 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 RN7SL589P-201ENST00000481268 310 ntBASIC14.01□□□□□ -0.17
ABCA1O95477 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ABCA1O95477 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
ABCA1O95477 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.01□□□□□ -0.17
ABCA1O95477 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.01□□□□□ -0.17
ABCA1O95477 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.01□□□□□ -0.17
ABCA1O95477 AL596325.1-201ENST00000563991 1082 ntBASIC14.01□□□□□ -0.17
ABCA1O95477 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms