Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.96□□□□□ -0.02
CDRT1O95170 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDRT1O95170 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDRT1O95170 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.96□□□□□ -0.02
CDRT1O95170 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDRT1O95170 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
CDRT1O95170 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDRT1O95170 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDRT1O95170 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDRT1O95170 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDRT1O95170 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDRT1O95170 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDRT1O95170 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.95□□□□□ -0.02
CDRT1O95170 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDRT1O95170 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.95□□□□□ -0.02
CDRT1O95170 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 AC013268.4-201ENST00000637413 2228 ntBASIC14.95□□□□□ -0.02
CDRT1O95170 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.95□□□□□ -0.02
CDRT1O95170 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.95□□□□□ -0.02
CDRT1O95170 TSPY5P-201ENST00000426936 936 ntBASIC14.95□□□□□ -0.02
CDRT1O95170 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.95□□□□□ -0.02
CDRT1O95170 AC112907.2-201ENST00000448639 330 ntBASIC14.95□□□□□ -0.02
CDRT1O95170 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
CDRT1O95170 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
CDRT1O95170 RNF126P1-202ENST00000569893 925 ntBASIC14.95□□□□□ -0.02
CDRT1O95170 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CDRT1O95170 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 TNRC18P2-201ENST00000417666 2714 ntBASIC14.95□□□□□ -0.02
CDRT1O95170 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDRT1O95170 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDRT1O95170 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.95□□□□□ -0.02
CDRT1O95170 Z83836.1-201ENST00000624605 1642 ntBASIC14.95□□□□□ -0.02
CDRT1O95170 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
CDRT1O95170 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDRT1O95170 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDRT1O95170 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.94□□□□□ -0.02
CDRT1O95170 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 AL135999.2-201ENST00000622438 1686 ntBASIC14.94□□□□□ -0.02
CDRT1O95170 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 AC073508.3-201ENST00000619697 1419 ntBASIC14.94□□□□□ -0.02
CDRT1O95170 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.94□□□□□ -0.02
CDRT1O95170 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.94□□□□□ -0.02
CDRT1O95170 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CDRT1O95170 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDRT1O95170 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CDRT1O95170 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 AC005521.1-201ENST00000393351 872 ntBASIC14.94□□□□□ -0.02
CDRT1O95170 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.94□□□□□ -0.02
CDRT1O95170 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.94□□□□□ -0.02
CDRT1O95170 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.94□□□□□ -0.02
CDRT1O95170 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.94□□□□□ -0.02
CDRT1O95170 AL390719.2-201ENST00000606993 987 ntBASIC14.94□□□□□ -0.02
CDRT1O95170 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.94□□□□□ -0.02
CDRT1O95170 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.94□□□□□ -0.02
CDRT1O95170 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDRT1O95170 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.94□□□□□ -0.02
CDRT1O95170 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CDRT1O95170 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDRT1O95170 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDRT1O95170 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms