Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.57□□□□□ -0.08
UPK1BO75841 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK1BO75841 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
UPK1BO75841 REXO1L8P-201ENST00000604378 1897 ntBASIC14.57□□□□□ -0.08
UPK1BO75841 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK1BO75841 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK1BO75841 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK1BO75841 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.56□□□□□ -0.08
UPK1BO75841 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
UPK1BO75841 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK1BO75841 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
UPK1BO75841 OR2I1P-210ENST00000642037 4691 ntBASIC14.56□□□□□ -0.08
UPK1BO75841 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.56□□□□□ -0.08
UPK1BO75841 AC239809.2-201ENST00000415381 517 ntBASIC14.56□□□□□ -0.08
UPK1BO75841 AC096633.1-201ENST00000422446 749 ntBASIC14.56□□□□□ -0.08
UPK1BO75841 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.56□□□□□ -0.08
UPK1BO75841 AC009154.2-201ENST00000621177 724 ntBASIC14.56□□□□□ -0.08
UPK1BO75841 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.56□□□□□ -0.08
UPK1BO75841 AL023875.1-201ENST00000640777 796 ntBASIC14.56□□□□□ -0.08
UPK1BO75841 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK1BO75841 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK1BO75841 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK1BO75841 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
UPK1BO75841 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK1BO75841 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
UPK1BO75841 AC013726.1-201ENST00000563747 2285 ntBASIC14.55□□□□□ -0.08
UPK1BO75841 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
UPK1BO75841 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.55□□□□□ -0.08
UPK1BO75841 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
UPK1BO75841 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 MESTP1-201ENST00000404287 994 ntBASIC14.55□□□□□ -0.08
UPK1BO75841 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.55□□□□□ -0.08
UPK1BO75841 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.55□□□□□ -0.08
UPK1BO75841 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.55□□□□□ -0.08
UPK1BO75841 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 AC124016.1-201ENST00000609552 612 ntBASIC14.55□□□□□ -0.08
UPK1BO75841 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
UPK1BO75841 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
UPK1BO75841 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK1BO75841 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK1BO75841 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms