Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GPC4O75487 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.79■□□□□ 0.28
GPC4O75487 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
GPC4O75487 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC4O75487 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC4O75487 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.79■□□□□ 0.28
GPC4O75487 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.79■□□□□ 0.28
GPC4O75487 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GPC4O75487 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.79■□□□□ 0.28
GPC4O75487 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GPC4O75487 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC4O75487 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
GPC4O75487 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GPC4O75487 AC092068.3-201ENST00000587894 2016 ntBASIC16.79■□□□□ 0.28
GPC4O75487 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC4O75487 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC4O75487 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GPC4O75487 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.79■□□□□ 0.28
GPC4O75487 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.79■□□□□ 0.28
GPC4O75487 PAWRP1-201ENST00000451083 565 ntBASIC16.79■□□□□ 0.28
GPC4O75487 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.79■□□□□ 0.28
GPC4O75487 AL662844.1-201ENST00000546340 181 ntBASIC16.79■□□□□ 0.28
GPC4O75487 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.79■□□□□ 0.28
GPC4O75487 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.79■□□□□ 0.28
GPC4O75487 AL805961.1-202ENST00000641562 540 ntBASIC16.79■□□□□ 0.28
GPC4O75487 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GPC4O75487 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.79■□□□□ 0.28
GPC4O75487 AC008741.2-201ENST00000612792 3115 ntBASIC16.79■□□□□ 0.28
GPC4O75487 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC4O75487 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
GPC4O75487 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
GPC4O75487 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GPC4O75487 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GPC4O75487 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GPC4O75487 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GPC4O75487 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
GPC4O75487 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
GPC4O75487 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
GPC4O75487 AC243591.1-201ENST00000452967 1364 ntBASIC16.78■□□□□ 0.28
GPC4O75487 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.78■□□□□ 0.28
GPC4O75487 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.78■□□□□ 0.28
GPC4O75487 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.78■□□□□ 0.28
GPC4O75487 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.78■□□□□ 0.28
GPC4O75487 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 AC136632.2-201ENST00000512891 861 ntBASIC16.78■□□□□ 0.28
GPC4O75487 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.78■□□□□ 0.28
GPC4O75487 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
GPC4O75487 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.78■□□□□ 0.28
GPC4O75487 AL049840.3-201ENST00000602669 611 ntBASIC16.78■□□□□ 0.28
GPC4O75487 MIR7706-201ENST00000613747 67 ntBASIC16.78■□□□□ 0.28
GPC4O75487 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
GPC4O75487 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.78■□□□□ 0.28
GPC4O75487 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
GPC4O75487 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.78■□□□□ 0.28
GPC4O75487 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GPC4O75487 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
GPC4O75487 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GPC4O75487 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.78■□□□□ 0.28
GPC4O75487 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.78■□□□□ 0.28
GPC4O75487 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.78■□□□□ 0.28
GPC4O75487 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.78■□□□□ 0.28
GPC4O75487 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
GPC4O75487 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GPC4O75487 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GPC4O75487 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.77■□□□□ 0.28
GPC4O75487 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
GPC4O75487 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GPC4O75487 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
GPC4O75487 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
GPC4O75487 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
GPC4O75487 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.77■□□□□ 0.28
GPC4O75487 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.77■□□□□ 0.28
GPC4O75487 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.77■□□□□ 0.28
GPC4O75487 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.77■□□□□ 0.28
GPC4O75487 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.77■□□□□ 0.28
GPC4O75487 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
GPC4O75487 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms