Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.89■□□□□ 0.13
PROM1O43490 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PROM1O43490 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PROM1O43490 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PROM1O43490 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.88■□□□□ 0.13
PROM1O43490 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.88■□□□□ 0.13
PROM1O43490 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PROM1O43490 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.88■□□□□ 0.13
PROM1O43490 AC006538.1-201ENST00000567905 1585 ntBASIC15.88■□□□□ 0.13
PROM1O43490 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PROM1O43490 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 SNX33P1-201ENST00000592116 1762 ntBASIC15.88■□□□□ 0.13
PROM1O43490 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 AC092171.3-201ENST00000610122 2651 ntBASIC15.88■□□□□ 0.13
PROM1O43490 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 MIR574-201ENST00000385209 96 ntBASIC15.88■□□□□ 0.13
PROM1O43490 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.88■□□□□ 0.13
PROM1O43490 IGLL3P-201ENST00000412472 434 ntBASIC15.88■□□□□ 0.13
PROM1O43490 HCG4-201ENST00000418983 998 ntBASIC15.88■□□□□ 0.13
PROM1O43490 HLA-J-202ENST00000469281 1241 ntBASIC15.88■□□□□ 0.13
PROM1O43490 AC087641.1-201ENST00000557561 1021 ntBASIC15.88■□□□□ 0.13
PROM1O43490 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.88■□□□□ 0.13
PROM1O43490 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PROM1O43490 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
PROM1O43490 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
PROM1O43490 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 PCDHA14-201ENST00000506751 2298 ntBASIC15.88■□□□□ 0.13
PROM1O43490 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PROM1O43490 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.87■□□□□ 0.13
PROM1O43490 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.87■□□□□ 0.13
PROM1O43490 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PROM1O43490 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.87■□□□□ 0.13
PROM1O43490 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.87■□□□□ 0.13
PROM1O43490 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PROM1O43490 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.87■□□□□ 0.13
PROM1O43490 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PROM1O43490 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
PROM1O43490 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.87■□□□□ 0.13
PROM1O43490 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PROM1O43490 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.87■□□□□ 0.13
PROM1O43490 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.87■□□□□ 0.13
PROM1O43490 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.87■□□□□ 0.13
PROM1O43490 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PROM1O43490 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 CYP2A7P1-201ENST00000595391 815 ntBASIC15.87■□□□□ 0.13
PROM1O43490 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PROM1O43490 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.87■□□□□ 0.13
PROM1O43490 AP001350.2-201ENST00000625104 1094 ntBASIC15.87■□□□□ 0.13
PROM1O43490 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
PROM1O43490 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PROM1O43490 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PROM1O43490 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PROM1O43490 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.86■□□□□ 0.13
PROM1O43490 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PROM1O43490 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PROM1O43490 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.86■□□□□ 0.13
PROM1O43490 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PROM1O43490 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PROM1O43490 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PROM1O43490 PCDH8P1-201ENST00000428983 2773 ntBASIC15.86■□□□□ 0.13
PROM1O43490 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PROM1O43490 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PROM1O43490 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.86■□□□□ 0.13
PROM1O43490 AC012569.1-201ENST00000591191 1524 ntBASIC15.86■□□□□ 0.13
PROM1O43490 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
PROM1O43490 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PROM1O43490 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PROM1O43490 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.86■□□□□ 0.13
PROM1O43490 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PROM1O43490 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.86■□□□□ 0.13
PROM1O43490 AC096734.2-201ENST00000562054 433 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms