Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AP001350.2-201ENST00000625104 1094 ntBASIC17.73■□□□□ 0.43
TNRC18O15417 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNRC18O15417 CROCCP3-202ENST00000420820 1947 ntBASIC17.73■□□□□ 0.43
TNRC18O15417 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.73■□□□□ 0.43
TNRC18O15417 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNRC18O15417 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNRC18O15417 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNRC18O15417 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TNRC18O15417 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.73■□□□□ 0.43
TNRC18O15417 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNRC18O15417 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNRC18O15417 AC015818.8-201ENST00000587907 1519 ntBASIC17.73■□□□□ 0.43
TNRC18O15417 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNRC18O15417 HOMER2P2-201ENST00000451621 847 ntBASIC17.73■□□□□ 0.43
TNRC18O15417 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.73■□□□□ 0.43
TNRC18O15417 AC022217.1-201ENST00000521069 738 ntBASIC17.73■□□□□ 0.43
TNRC18O15417 LINC01115-203ENST00000606068 577 ntBASIC17.73■□□□□ 0.43
TNRC18O15417 AC025181.2-201ENST00000606994 802 ntBASIC17.73■□□□□ 0.43
TNRC18O15417 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.73■□□□□ 0.43
TNRC18O15417 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TNRC18O15417 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.73■□□□□ 0.43
TNRC18O15417 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
TNRC18O15417 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNRC18O15417 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNRC18O15417 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.72■□□□□ 0.43
TNRC18O15417 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TNRC18O15417 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNRC18O15417 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNRC18O15417 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.72■□□□□ 0.43
TNRC18O15417 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.72■□□□□ 0.43
TNRC18O15417 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNRC18O15417 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.72■□□□□ 0.43
TNRC18O15417 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNRC18O15417 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TNRC18O15417 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNRC18O15417 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.72■□□□□ 0.43
TNRC18O15417 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNRC18O15417 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.72■□□□□ 0.43
TNRC18O15417 FGFR3P1-201ENST00000449999 601 ntBASIC17.72■□□□□ 0.43
TNRC18O15417 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.72■□□□□ 0.43
TNRC18O15417 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.72■□□□□ 0.43
TNRC18O15417 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNRC18O15417 AC025271.4-201ENST00000621477 1726 ntBASIC17.72■□□□□ 0.43
TNRC18O15417 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNRC18O15417 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.72■□□□□ 0.43
TNRC18O15417 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNRC18O15417 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TNRC18O15417 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNRC18O15417 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNRC18O15417 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNRC18O15417 FAM86LP-201ENST00000478302 853 ntBASIC17.71■□□□□ 0.43
TNRC18O15417 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.71■□□□□ 0.43
TNRC18O15417 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.71■□□□□ 0.43
TNRC18O15417 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.71■□□□□ 0.43
TNRC18O15417 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.71■□□□□ 0.43
TNRC18O15417 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.71■□□□□ 0.43
TNRC18O15417 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNRC18O15417 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNRC18O15417 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNRC18O15417 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
TNRC18O15417 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TNRC18O15417 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNRC18O15417 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.71■□□□□ 0.43
TNRC18O15417 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.71■□□□□ 0.43
TNRC18O15417 TUBBP5-203ENST00000508529 1334 ntBASIC17.71■□□□□ 0.43
TNRC18O15417 TOP3BP1-201ENST00000420768 1380 ntBASIC17.71■□□□□ 0.43
TNRC18O15417 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.71■□□□□ 0.43
TNRC18O15417 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.71■□□□□ 0.43
TNRC18O15417 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TNRC18O15417 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
TNRC18O15417 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TNRC18O15417 ALG1L13P-202ENST00000519320 584 ntBASIC17.7■□□□□ 0.42
TNRC18O15417 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.7■□□□□ 0.42
TNRC18O15417 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.7■□□□□ 0.42
TNRC18O15417 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TNRC18O15417 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TNRC18O15417 Z97205.2-201ENST00000564697 1639 ntBASIC17.7■□□□□ 0.42
TNRC18O15417 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TNRC18O15417 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.7■□□□□ 0.42
TNRC18O15417 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 IGHV3-37-201ENST00000518544 340 ntBASIC17.7■□□□□ 0.42
TNRC18O15417 DNM1P51-201ENST00000558149 522 ntBASIC17.7■□□□□ 0.42
TNRC18O15417 AC120045.2-201ENST00000567334 178 ntBASIC17.7■□□□□ 0.42
TNRC18O15417 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.7■□□□□ 0.42
TNRC18O15417 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.7■□□□□ 0.42
TNRC18O15417 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNRC18O15417 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms