Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
UPK1AO00322 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.85■□□□□ 0.13
UPK1AO00322 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.85■□□□□ 0.13
UPK1AO00322 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.85■□□□□ 0.13
UPK1AO00322 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.85■□□□□ 0.13
UPK1AO00322 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.85■□□□□ 0.13
UPK1AO00322 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 AC087163.2-201ENST00000457299 853 ntBASIC15.85■□□□□ 0.13
UPK1AO00322 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.85■□□□□ 0.13
UPK1AO00322 RPS15P9-201ENST00000494093 319 ntBASIC15.85■□□□□ 0.13
UPK1AO00322 AC136632.2-201ENST00000512891 861 ntBASIC15.85■□□□□ 0.13
UPK1AO00322 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.85■□□□□ 0.13
UPK1AO00322 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.85■□□□□ 0.13
UPK1AO00322 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.85■□□□□ 0.13
UPK1AO00322 AC012640.2-201ENST00000561606 901 ntBASIC15.85■□□□□ 0.13
UPK1AO00322 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.85■□□□□ 0.13
UPK1AO00322 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.85■□□□□ 0.13
UPK1AO00322 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
UPK1AO00322 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.85■□□□□ 0.13
UPK1AO00322 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK1AO00322 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.85■□□□□ 0.13
UPK1AO00322 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
UPK1AO00322 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
UPK1AO00322 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.84■□□□□ 0.13
UPK1AO00322 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
UPK1AO00322 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.84■□□□□ 0.13
UPK1AO00322 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.84■□□□□ 0.13
UPK1AO00322 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
UPK1AO00322 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
UPK1AO00322 AP002469.2-201ENST00000531724 424 ntBASIC15.84■□□□□ 0.13
UPK1AO00322 AL160237.2-201ENST00000556165 472 ntBASIC15.84■□□□□ 0.13
UPK1AO00322 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.84■□□□□ 0.13
UPK1AO00322 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.84■□□□□ 0.13
UPK1AO00322 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.84■□□□□ 0.13
UPK1AO00322 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.84■□□□□ 0.13
UPK1AO00322 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.84■□□□□ 0.13
UPK1AO00322 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
UPK1AO00322 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.84■□□□□ 0.13
UPK1AO00322 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 AC002310.6-201ENST00000624451 1377 ntBASIC15.84■□□□□ 0.13
UPK1AO00322 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
UPK1AO00322 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UPK1AO00322 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.84■□□□□ 0.13
UPK1AO00322 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UPK1AO00322 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UPK1AO00322 AC006538.1-201ENST00000567905 1585 ntBASIC15.83■□□□□ 0.13
UPK1AO00322 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
UPK1AO00322 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UPK1AO00322 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
UPK1AO00322 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UPK1AO00322 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
UPK1AO00322 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1AO00322 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1AO00322 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1AO00322 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1AO00322 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1AO00322 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1AO00322 RPS2P28-201ENST00000314255 741 ntBASIC15.83■□□□□ 0.12
UPK1AO00322 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1AO00322 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.83■□□□□ 0.12
UPK1AO00322 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
UPK1AO00322 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.83■□□□□ 0.12
UPK1AO00322 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.83■□□□□ 0.12
UPK1AO00322 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.83■□□□□ 0.12
UPK1AO00322 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.83■□□□□ 0.12
UPK1AO00322 AC105339.3-201ENST00000560043 636 ntBASIC15.83■□□□□ 0.12
UPK1AO00322 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.83■□□□□ 0.12
UPK1AO00322 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.83■□□□□ 0.12
UPK1AO00322 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1AO00322 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.83■□□□□ 0.12
UPK1AO00322 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1AO00322 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1AO00322 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.83■□□□□ 0.12
UPK1AO00322 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
UPK1AO00322 TOP3BP1-201ENST00000420768 1380 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms