Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 IGHGP-201ENST00000390555 1178 ntBASIC12.27□□□□□ -0.45
SMKR1H3BMG3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 TSPY7P-201ENST00000431358 1114 ntBASIC12.27□□□□□ -0.45
SMKR1H3BMG3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 RASA4DP-201ENST00000460726 1199 ntBASIC12.27□□□□□ -0.45
SMKR1H3BMG3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 FAM87A-204ENST00000613235 858 ntBASIC12.27□□□□□ -0.45
SMKR1H3BMG3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 KRT8P10-201ENST00000450021 1447 ntBASIC12.27□□□□□ -0.45
SMKR1H3BMG3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 CYP2D8P-201ENST00000433633 1490 ntBASIC12.27□□□□□ -0.45
SMKR1H3BMG3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMKR1H3BMG3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 STK25P1-201ENST00000585406 838 ntBASIC12.26□□□□□ -0.45
SMKR1H3BMG3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 AC092666.2-201ENST00000613287 246 ntBASIC12.26□□□□□ -0.45
SMKR1H3BMG3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.26□□□□□ -0.45
SMKR1H3BMG3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.26□□□□□ -0.45
SMKR1H3BMG3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 AL049757.1-201ENST00000616842 1596 ntBASIC12.26□□□□□ -0.45
SMKR1H3BMG3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMKR1H3BMG3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms