Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 AC140658.5-201ENST00000438532 169 ntBASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 ACTG1P14-201ENST00000446382 1122 ntBASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 HLA-J-202ENST00000469281 1241 ntBASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 AL161645.1-201ENST00000622716 1255 ntBASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM9A6NGZ8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 AL391256.1-201ENST00000443260 1855 ntBASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 HMGA1P7-201ENST00000406908 502 ntBASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 MKNK2P1-201ENST00000437526 628 ntBASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 AC109635.5-201ENST00000533593 962 ntBASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 AL671883.3-201ENST00000603274 991 ntBASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 AC060834.1-201ENST00000443027 2032 ntBASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 KRT8P39-201ENST00000396270 1433 ntBASIC12.11□□□□□ -0.47
SMIM9A6NGZ8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 SLC22A20-204ENST00000530038 1673 ntBASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SMIM9A6NGZ8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms