Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 LIN28AP1-201ENST00000429574 405 ntBASIC14.57□□□□□ -0.08
SHISA3A0PJX4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 AC009533.2-201ENST00000543664 586 ntBASIC14.57□□□□□ -0.08
SHISA3A0PJX4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 AC011840.4-201ENST00000578471 627 ntBASIC14.57□□□□□ -0.08
SHISA3A0PJX4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 AC083849.1-201ENST00000615227 514 ntBASIC14.57□□□□□ -0.08
SHISA3A0PJX4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.57□□□□□ -0.08
SHISA3A0PJX4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 TSPY22P-201ENST00000427496 604 ntBASIC14.56□□□□□ -0.08
SHISA3A0PJX4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 ATP5G1P1-201ENST00000448724 379 ntBASIC14.56□□□□□ -0.08
SHISA3A0PJX4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 AP005901.3-202ENST00000581653 237 ntBASIC14.56□□□□□ -0.08
SHISA3A0PJX4 TERC-201ENST00000602385 541 ntBASIC14.56□□□□□ -0.08
SHISA3A0PJX4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHISA3A0PJX4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHISA3A0PJX4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms