Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 PMPCAP1-201ENST00000508114 1576 ntBASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 GPR89P-201ENST00000407924 1495 ntBASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 MIR3180-1-201ENST00000580374 94 ntBASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 MIR3180-3-201ENST00000584616 94 ntBASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF103-CHMP3A0A140T963 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 AC024909.3-201ENST00000611513 2257 ntBASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 AC092329.2-201ENST00000598402 547 ntBASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 AL358472.4-201ENST00000633140 710 ntBASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 AC148477.5-201ENST00000625164 1645 ntBASIC16.16■□□□□ 0.18
RNF103-CHMP3A0A140T963 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF103-CHMP3A0A140T963 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF103-CHMP3A0A140T963 FRMD8P1-201ENST00000440433 1524 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms