Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA9Q9Y5H5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHA9Q9Y5H5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHA9Q9Y5H5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHA9Q9Y5H5 GPX1-201ENST00000419349 1106 ntBASIC22.96■■□□□ 1.27
PCDHA9Q9Y5H5 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
PCDHA9Q9Y5H5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.96■■□□□ 1.27
PCDHA9Q9Y5H5 SMPD5-203ENST00000639008 1464 ntBASIC22.96■■□□□ 1.27
PCDHA9Q9Y5H5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHA9Q9Y5H5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHA9Q9Y5H5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHA9Q9Y5H5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHA9Q9Y5H5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.95■■□□□ 1.26
PCDHA9Q9Y5H5 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHA9Q9Y5H5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
PCDHA9Q9Y5H5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHA9Q9Y5H5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.94■■□□□ 1.26
PCDHA9Q9Y5H5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDHA9Q9Y5H5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDHA9Q9Y5H5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHA9Q9Y5H5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDHA9Q9Y5H5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.93■■□□□ 1.26
PCDHA9Q9Y5H5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHA9Q9Y5H5 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA9Q9Y5H5 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
PCDHA9Q9Y5H5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.92■■□□□ 1.26
PCDHA9Q9Y5H5 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA9Q9Y5H5 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.92■■□□□ 1.26
PCDHA9Q9Y5H5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA9Q9Y5H5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA9Q9Y5H5 MIR3960-201ENST00000583311 91 ntBASIC22.92■■□□□ 1.26
PCDHA9Q9Y5H5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA9Q9Y5H5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.92■■□□□ 1.26
PCDHA9Q9Y5H5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA9Q9Y5H5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA9Q9Y5H5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA9Q9Y5H5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA9Q9Y5H5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA9Q9Y5H5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA9Q9Y5H5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA9Q9Y5H5 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
PCDHA9Q9Y5H5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHA9Q9Y5H5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA9Q9Y5H5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHA9Q9Y5H5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.89■■□□□ 1.26
PCDHA9Q9Y5H5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHA9Q9Y5H5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHA9Q9Y5H5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.88■■□□□ 1.25
PCDHA9Q9Y5H5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHA9Q9Y5H5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA9Q9Y5H5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHA9Q9Y5H5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA9Q9Y5H5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.88■■□□□ 1.25
PCDHA9Q9Y5H5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PCDHA9Q9Y5H5 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA9Q9Y5H5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA9Q9Y5H5 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
PCDHA9Q9Y5H5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA9Q9Y5H5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDHA9Q9Y5H5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHA9Q9Y5H5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.87■■□□□ 1.25
PCDHA9Q9Y5H5 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.87■■□□□ 1.25
PCDHA9Q9Y5H5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHA9Q9Y5H5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHA9Q9Y5H5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHA9Q9Y5H5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
PCDHA9Q9Y5H5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
PCDHA9Q9Y5H5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PCDHA9Q9Y5H5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHA9Q9Y5H5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHA9Q9Y5H5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHA9Q9Y5H5 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.86■■□□□ 1.25
PCDHA9Q9Y5H5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
PCDHA9Q9Y5H5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHA9Q9Y5H5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHA9Q9Y5H5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.85■■□□□ 1.25
PCDHA9Q9Y5H5 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.85■■□□□ 1.25
PCDHA9Q9Y5H5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHA9Q9Y5H5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHA9Q9Y5H5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHA9Q9Y5H5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHA9Q9Y5H5 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHA9Q9Y5H5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHA9Q9Y5H5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHA9Q9Y5H5 RP9P-202ENST00000450133 1212 ntBASIC22.84■■□□□ 1.25
PCDHA9Q9Y5H5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms