Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LSM5Q9Y4Y9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM5Q9Y4Y9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM5Q9Y4Y9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.57■□□□□ 0.72
LSM5Q9Y4Y9 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.57■□□□□ 0.72
LSM5Q9Y4Y9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.57■□□□□ 0.72
LSM5Q9Y4Y9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.57■□□□□ 0.72
LSM5Q9Y4Y9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM5Q9Y4Y9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LSM5Q9Y4Y9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM5Q9Y4Y9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM5Q9Y4Y9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
LSM5Q9Y4Y9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.56■□□□□ 0.72
LSM5Q9Y4Y9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.56■□□□□ 0.72
LSM5Q9Y4Y9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.56■□□□□ 0.72
LSM5Q9Y4Y9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM5Q9Y4Y9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSM5Q9Y4Y9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM5Q9Y4Y9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSM5Q9Y4Y9 AP003733.4-201ENST00000623785 1697 ntBASIC19.56■□□□□ 0.72
LSM5Q9Y4Y9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM5Q9Y4Y9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM5Q9Y4Y9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM5Q9Y4Y9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.55■□□□□ 0.72
LSM5Q9Y4Y9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LSM5Q9Y4Y9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.55■□□□□ 0.72
LSM5Q9Y4Y9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.55■□□□□ 0.72
LSM5Q9Y4Y9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM5Q9Y4Y9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LSM5Q9Y4Y9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSM5Q9Y4Y9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSM5Q9Y4Y9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
LSM5Q9Y4Y9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSM5Q9Y4Y9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM5Q9Y4Y9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM5Q9Y4Y9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM5Q9Y4Y9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM5Q9Y4Y9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM5Q9Y4Y9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LSM5Q9Y4Y9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM5Q9Y4Y9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM5Q9Y4Y9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.52■□□□□ 0.72
LSM5Q9Y4Y9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LSM5Q9Y4Y9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LSM5Q9Y4Y9 AC079834.2-201ENST00000609776 1949 ntBASIC19.52■□□□□ 0.72
LSM5Q9Y4Y9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.52■□□□□ 0.71
LSM5Q9Y4Y9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
LSM5Q9Y4Y9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM5Q9Y4Y9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LSM5Q9Y4Y9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LSM5Q9Y4Y9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.51■□□□□ 0.71
LSM5Q9Y4Y9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LSM5Q9Y4Y9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LSM5Q9Y4Y9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM5Q9Y4Y9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LSM5Q9Y4Y9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LSM5Q9Y4Y9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LSM5Q9Y4Y9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM5Q9Y4Y9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.5■□□□□ 0.71
LSM5Q9Y4Y9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM5Q9Y4Y9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM5Q9Y4Y9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM5Q9Y4Y9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LSM5Q9Y4Y9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.49■□□□□ 0.71
LSM5Q9Y4Y9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM5Q9Y4Y9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM5Q9Y4Y9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM5Q9Y4Y9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.49■□□□□ 0.71
LSM5Q9Y4Y9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM5Q9Y4Y9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LSM5Q9Y4Y9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM5Q9Y4Y9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LSM5Q9Y4Y9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LSM5Q9Y4Y9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LSM5Q9Y4Y9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.49■□□□□ 0.71
LSM5Q9Y4Y9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LSM5Q9Y4Y9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.48■□□□□ 0.71
LSM5Q9Y4Y9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM5Q9Y4Y9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.48■□□□□ 0.71
LSM5Q9Y4Y9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM5Q9Y4Y9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM5Q9Y4Y9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.47■□□□□ 0.71
LSM5Q9Y4Y9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM5Q9Y4Y9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LSM5Q9Y4Y9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM5Q9Y4Y9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
LSM5Q9Y4Y9 LINC00543-201ENST00000567234 1845 ntBASIC19.47■□□□□ 0.71
LSM5Q9Y4Y9 PKD1P6-201ENST00000343738 4769 ntBASIC19.47■□□□□ 0.71
LSM5Q9Y4Y9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM5Q9Y4Y9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM5Q9Y4Y9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LSM5Q9Y4Y9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM5Q9Y4Y9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM5Q9Y4Y9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM5Q9Y4Y9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM5Q9Y4Y9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.46■□□□□ 0.71
LSM5Q9Y4Y9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.46■□□□□ 0.71
LSM5Q9Y4Y9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM5Q9Y4Y9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM5Q9Y4Y9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 270.5 ms