Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PTPN22Q9Y2R2 MIR6724-3-201ENST00000622482 92 ntBASIC27.68■■■□□ 2.02
PTPN22Q9Y2R2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
PTPN22Q9Y2R2 KRT18P10-201ENST00000388836 1287 ntBASIC27.67■■■□□ 2.02
PTPN22Q9Y2R2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PTPN22Q9Y2R2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.67■■■□□ 2.02
PTPN22Q9Y2R2 AL356740.2-201ENST00000601559 647 ntBASIC27.67■■■□□ 2.02
PTPN22Q9Y2R2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
PTPN22Q9Y2R2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.67■■■□□ 2.02
PTPN22Q9Y2R2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PTPN22Q9Y2R2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.66■■■□□ 2.02
PTPN22Q9Y2R2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
PTPN22Q9Y2R2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.66■■■□□ 2.02
PTPN22Q9Y2R2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
PTPN22Q9Y2R2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PTPN22Q9Y2R2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PTPN22Q9Y2R2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.64■■■□□ 2.02
PTPN22Q9Y2R2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
PTPN22Q9Y2R2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.63■■■□□ 2.01
PTPN22Q9Y2R2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
PTPN22Q9Y2R2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC27.62■■■□□ 2.01
PTPN22Q9Y2R2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.61■■■□□ 2.01
PTPN22Q9Y2R2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PTPN22Q9Y2R2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PTPN22Q9Y2R2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.6■■■□□ 2.01
PTPN22Q9Y2R2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
PTPN22Q9Y2R2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC27.6■■■□□ 2.01
PTPN22Q9Y2R2 MIR5787-201ENST00000611784 55 ntBASIC27.6■■■□□ 2.01
PTPN22Q9Y2R2 AC135279.3-201ENST00000610945 1311 ntBASIC27.6■■■□□ 2.01
PTPN22Q9Y2R2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
PTPN22Q9Y2R2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.59■■■□□ 2.01
PTPN22Q9Y2R2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.59■■■□□ 2.01
PTPN22Q9Y2R2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.59■■■□□ 2.01
PTPN22Q9Y2R2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PTPN22Q9Y2R2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.58■■■□□ 2.01
PTPN22Q9Y2R2 MTDHP2-201ENST00000601468 714 ntBASIC27.58■■■□□ 2.01
PTPN22Q9Y2R2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
PTPN22Q9Y2R2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PTPN22Q9Y2R2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PTPN22Q9Y2R2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.57■■■□□ 2
PTPN22Q9Y2R2 AC142381.2-201ENST00000566120 298 ntBASIC27.57■■■□□ 2
PTPN22Q9Y2R2 AL512631.2-201ENST00000604634 923 ntBASIC27.57■■■□□ 2
PTPN22Q9Y2R2 AC106739.1-201ENST00000617035 715 ntBASIC27.57■■■□□ 2
PTPN22Q9Y2R2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC27.57■■■□□ 2
PTPN22Q9Y2R2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.57■■■□□ 2
PTPN22Q9Y2R2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.56■■■□□ 2
PTPN22Q9Y2R2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.56■■■□□ 2
PTPN22Q9Y2R2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PTPN22Q9Y2R2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.56■■■□□ 2
PTPN22Q9Y2R2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.55■■■□□ 2
PTPN22Q9Y2R2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PTPN22Q9Y2R2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.55■■■□□ 2
PTPN22Q9Y2R2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.55■■■□□ 2
PTPN22Q9Y2R2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PTPN22Q9Y2R2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PTPN22Q9Y2R2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PTPN22Q9Y2R2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
PTPN22Q9Y2R2 PBX2P1-201ENST00000493219 1291 ntBASIC27.54■■■□□ 2
PTPN22Q9Y2R2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC27.54■■■□□ 2
PTPN22Q9Y2R2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PTPN22Q9Y2R2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.53■■■□□ 2
PTPN22Q9Y2R2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.53■■■□□ 2
PTPN22Q9Y2R2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.53■■■□□ 2
PTPN22Q9Y2R2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC27.53■■■□□ 2
PTPN22Q9Y2R2 MIR4281-201ENST00000580852 62 ntBASIC27.53■■■□□ 2
PTPN22Q9Y2R2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.53■■■□□ 2
PTPN22Q9Y2R2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.53■■■□□ 2
PTPN22Q9Y2R2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.53■■■□□ 2
PTPN22Q9Y2R2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
PTPN22Q9Y2R2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PTPN22Q9Y2R2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC27.52■■■□□ 2
PTPN22Q9Y2R2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.52■■■□□ 2
PTPN22Q9Y2R2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC27.52■■■□□ 2
PTPN22Q9Y2R2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
PTPN22Q9Y2R2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.52■■■□□ 2
PTPN22Q9Y2R2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PTPN22Q9Y2R2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
PTPN22Q9Y2R2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC27.51■■□□□ 1.99
PTPN22Q9Y2R2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC27.51■■□□□ 1.99
PTPN22Q9Y2R2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
PTPN22Q9Y2R2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.51■■□□□ 1.99
PTPN22Q9Y2R2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.51■■□□□ 1.99
PTPN22Q9Y2R2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
PTPN22Q9Y2R2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PTPN22Q9Y2R2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PTPN22Q9Y2R2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PTPN22Q9Y2R2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PTPN22Q9Y2R2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.5■■□□□ 1.99
PTPN22Q9Y2R2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTPN22Q9Y2R2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
PTPN22Q9Y2R2 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.49■■□□□ 1.99
PTPN22Q9Y2R2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.49■■□□□ 1.99
PTPN22Q9Y2R2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
PTPN22Q9Y2R2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTPN22Q9Y2R2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PTPN22Q9Y2R2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
PTPN22Q9Y2R2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PTPN22Q9Y2R2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC27.47■■□□□ 1.99
PTPN22Q9Y2R2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC27.47■■□□□ 1.99
PTPN22Q9Y2R2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms