Protein–RNA interactions for Protein: Q9UPA5

BSN, Protein bassoon, humanhuman

Predictions only

Length 3,926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSNQ9UPA5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22■■□□□ 1.11
BSNQ9UPA5 AC120024.1-201ENST00000562672 995 ntBASIC22■■□□□ 1.11
BSNQ9UPA5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22■■□□□ 1.11
BSNQ9UPA5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
BSNQ9UPA5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
BSNQ9UPA5 SUDS3P1-201ENST00000505831 966 ntBASIC21.99■■□□□ 1.11
BSNQ9UPA5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.99■■□□□ 1.11
BSNQ9UPA5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
BSNQ9UPA5 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.99■■□□□ 1.11
BSNQ9UPA5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
BSNQ9UPA5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
BSNQ9UPA5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.98■■□□□ 1.11
BSNQ9UPA5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.98■■□□□ 1.11
BSNQ9UPA5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
BSNQ9UPA5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
BSNQ9UPA5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
BSNQ9UPA5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.97■■□□□ 1.11
BSNQ9UPA5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BSNQ9UPA5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BSNQ9UPA5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
BSNQ9UPA5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
BSNQ9UPA5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BSNQ9UPA5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BSNQ9UPA5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BSNQ9UPA5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.96■■□□□ 1.11
BSNQ9UPA5 BX255925.1-201ENST00000566954 1854 ntBASIC21.96■■□□□ 1.11
BSNQ9UPA5 AC106739.1-201ENST00000617035 715 ntBASIC21.96■■□□□ 1.11
BSNQ9UPA5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
BSNQ9UPA5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BSNQ9UPA5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
BSNQ9UPA5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
BSNQ9UPA5 MIR5787-201ENST00000611784 55 ntBASIC21.95■■□□□ 1.1
BSNQ9UPA5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.95■■□□□ 1.1
BSNQ9UPA5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
BSNQ9UPA5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
BSNQ9UPA5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BSNQ9UPA5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.94■■□□□ 1.1
BSNQ9UPA5 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BSNQ9UPA5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BSNQ9UPA5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.94■■□□□ 1.1
BSNQ9UPA5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.94■■□□□ 1.1
BSNQ9UPA5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BSNQ9UPA5 AC139426.1-201ENST00000568218 2529 ntBASIC21.94■■□□□ 1.1
BSNQ9UPA5 AC104564.3-201ENST00000582367 638 ntBASIC21.94■■□□□ 1.1
BSNQ9UPA5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BSNQ9UPA5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.93■■□□□ 1.1
BSNQ9UPA5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
BSNQ9UPA5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
BSNQ9UPA5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BSNQ9UPA5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
BSNQ9UPA5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
BSNQ9UPA5 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.92■■□□□ 1.1
BSNQ9UPA5 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
BSNQ9UPA5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
BSNQ9UPA5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
BSNQ9UPA5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
BSNQ9UPA5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.91■■□□□ 1.1
BSNQ9UPA5 MIR4281-201ENST00000580852 62 ntBASIC21.91■■□□□ 1.1
BSNQ9UPA5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BSNQ9UPA5 MIR6724-1-201ENST00000616420 92 ntBASIC21.9■■□□□ 1.1
BSNQ9UPA5 MIR6724-2-201ENST00000616483 92 ntBASIC21.9■■□□□ 1.1
BSNQ9UPA5 MIR6724-4-201ENST00000617390 92 ntBASIC21.9■■□□□ 1.1
BSNQ9UPA5 MIR6724-3-201ENST00000622482 92 ntBASIC21.9■■□□□ 1.1
BSNQ9UPA5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.9■■□□□ 1.1
BSNQ9UPA5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
BSNQ9UPA5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.89■■□□□ 1.1
BSNQ9UPA5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
BSNQ9UPA5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
BSNQ9UPA5 AF131216.4-201ENST00000638924 1588 ntBASIC21.89■■□□□ 1.09
BSNQ9UPA5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.89■■□□□ 1.09
BSNQ9UPA5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.89■■□□□ 1.09
BSNQ9UPA5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BSNQ9UPA5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
BSNQ9UPA5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
BSNQ9UPA5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
BSNQ9UPA5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
BSNQ9UPA5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BSNQ9UPA5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.88■■□□□ 1.09
BSNQ9UPA5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BSNQ9UPA5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.88■■□□□ 1.09
BSNQ9UPA5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.87■■□□□ 1.09
BSNQ9UPA5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.87■■□□□ 1.09
BSNQ9UPA5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BSNQ9UPA5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BSNQ9UPA5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.87■■□□□ 1.09
BSNQ9UPA5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
BSNQ9UPA5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
BSNQ9UPA5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BSNQ9UPA5 AC010997.5-201ENST00000609182 354 ntBASIC21.87■■□□□ 1.09
BSNQ9UPA5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.87■■□□□ 1.09
BSNQ9UPA5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.86■■□□□ 1.09
BSNQ9UPA5 MIR6821-201ENST00000617625 74 ntBASIC21.86■■□□□ 1.09
BSNQ9UPA5 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
BSNQ9UPA5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
BSNQ9UPA5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BSNQ9UPA5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BSNQ9UPA5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BSNQ9UPA5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BSNQ9UPA5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
BSNQ9UPA5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms