Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGB4Q9UN71 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGB4Q9UN71 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGB4Q9UN71 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.97■■□□□ 1.27
PCDHGB4Q9UN71 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGB4Q9UN71 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGB4Q9UN71 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHGB4Q9UN71 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGB4Q9UN71 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.96■■□□□ 1.27
PCDHGB4Q9UN71 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHGB4Q9UN71 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
PCDHGB4Q9UN71 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGB4Q9UN71 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
PCDHGB4Q9UN71 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGB4Q9UN71 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGB4Q9UN71 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGB4Q9UN71 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGB4Q9UN71 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
PCDHGB4Q9UN71 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.94■■□□□ 1.26
PCDHGB4Q9UN71 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGB4Q9UN71 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGB4Q9UN71 AL359504.2-201ENST00000605506 1601 ntBASIC22.94■■□□□ 1.26
PCDHGB4Q9UN71 MIR3648-2-201ENST00000581792 180 ntBASIC22.94■■□□□ 1.26
PCDHGB4Q9UN71 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
PCDHGB4Q9UN71 MIR3648-1-201ENST00000615959 180 ntBASIC22.94■■□□□ 1.26
PCDHGB4Q9UN71 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
PCDHGB4Q9UN71 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGB4Q9UN71 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.93■■□□□ 1.26
PCDHGB4Q9UN71 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGB4Q9UN71 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.93■■□□□ 1.26
PCDHGB4Q9UN71 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGB4Q9UN71 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGB4Q9UN71 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
PCDHGB4Q9UN71 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGB4Q9UN71 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDHGB4Q9UN71 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDHGB4Q9UN71 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGB4Q9UN71 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHGB4Q9UN71 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGB4Q9UN71 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
PCDHGB4Q9UN71 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGB4Q9UN71 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGB4Q9UN71 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGB4Q9UN71 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.89■■□□□ 1.26
PCDHGB4Q9UN71 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHGB4Q9UN71 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGB4Q9UN71 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGB4Q9UN71 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
PCDHGB4Q9UN71 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGB4Q9UN71 AL139125.2-201ENST00000623134 1869 ntBASIC22.88■■□□□ 1.25
PCDHGB4Q9UN71 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGB4Q9UN71 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.88■■□□□ 1.25
PCDHGB4Q9UN71 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
PCDHGB4Q9UN71 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHGB4Q9UN71 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGB4Q9UN71 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
PCDHGB4Q9UN71 AC016575.1-201ENST00000607026 382 ntBASIC22.87■■□□□ 1.25
PCDHGB4Q9UN71 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDHGB4Q9UN71 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGB4Q9UN71 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDHGB4Q9UN71 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGB4Q9UN71 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
PCDHGB4Q9UN71 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGB4Q9UN71 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGB4Q9UN71 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDHGB4Q9UN71 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.86■■□□□ 1.25
PCDHGB4Q9UN71 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGB4Q9UN71 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGB4Q9UN71 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDHGB4Q9UN71 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGB4Q9UN71 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
PCDHGB4Q9UN71 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB4Q9UN71 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PCDHGB4Q9UN71 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB4Q9UN71 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB4Q9UN71 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDHGB4Q9UN71 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB4Q9UN71 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB4Q9UN71 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB4Q9UN71 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHGB4Q9UN71 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB4Q9UN71 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB4Q9UN71 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB4Q9UN71 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
PCDHGB4Q9UN71 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB4Q9UN71 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB4Q9UN71 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB4Q9UN71 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB4Q9UN71 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PCDHGB4Q9UN71 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGB4Q9UN71 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGB4Q9UN71 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PCDHGB4Q9UN71 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
PCDHGB4Q9UN71 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHGB4Q9UN71 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHGB4Q9UN71 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHGB4Q9UN71 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHGB4Q9UN71 AC138932.3-201ENST00000567634 1902 ntBASIC22.82■■□□□ 1.24
PCDHGB4Q9UN71 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGB4Q9UN71 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms