Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZCCHC4Q9H5U6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ZCCHC4Q9H5U6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZCCHC4Q9H5U6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.92■□□□□ 0.94
ZCCHC4Q9H5U6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.92■□□□□ 0.94
ZCCHC4Q9H5U6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZCCHC4Q9H5U6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZCCHC4Q9H5U6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZCCHC4Q9H5U6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZCCHC4Q9H5U6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZCCHC4Q9H5U6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZCCHC4Q9H5U6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.91■□□□□ 0.94
ZCCHC4Q9H5U6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZCCHC4Q9H5U6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.91■□□□□ 0.94
ZCCHC4Q9H5U6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
ZCCHC4Q9H5U6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZCCHC4Q9H5U6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.91■□□□□ 0.94
ZCCHC4Q9H5U6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
ZCCHC4Q9H5U6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZCCHC4Q9H5U6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZCCHC4Q9H5U6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.9■□□□□ 0.94
ZCCHC4Q9H5U6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZCCHC4Q9H5U6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZCCHC4Q9H5U6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZCCHC4Q9H5U6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZCCHC4Q9H5U6 LINC01124-201ENST00000409786 2117 ntBASIC20.9■□□□□ 0.94
ZCCHC4Q9H5U6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZCCHC4Q9H5U6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZCCHC4Q9H5U6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZCCHC4Q9H5U6 AL359504.2-201ENST00000605506 1601 ntBASIC20.89■□□□□ 0.94
ZCCHC4Q9H5U6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZCCHC4Q9H5U6 ZNRF2P2-203ENST00000454624 420 ntBASIC20.89■□□□□ 0.93
ZCCHC4Q9H5U6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
ZCCHC4Q9H5U6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZCCHC4Q9H5U6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZCCHC4Q9H5U6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZCCHC4Q9H5U6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZCCHC4Q9H5U6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZCCHC4Q9H5U6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.88■□□□□ 0.93
ZCCHC4Q9H5U6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.88■□□□□ 0.93
ZCCHC4Q9H5U6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.88■□□□□ 0.93
ZCCHC4Q9H5U6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZCCHC4Q9H5U6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZCCHC4Q9H5U6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZCCHC4Q9H5U6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZCCHC4Q9H5U6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZCCHC4Q9H5U6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZCCHC4Q9H5U6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.87■□□□□ 0.93
ZCCHC4Q9H5U6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.87■□□□□ 0.93
ZCCHC4Q9H5U6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ZCCHC4Q9H5U6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZCCHC4Q9H5U6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZCCHC4Q9H5U6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZCCHC4Q9H5U6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZCCHC4Q9H5U6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.86■□□□□ 0.93
ZCCHC4Q9H5U6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZCCHC4Q9H5U6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZCCHC4Q9H5U6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ZCCHC4Q9H5U6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
ZCCHC4Q9H5U6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZCCHC4Q9H5U6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZCCHC4Q9H5U6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.85■□□□□ 0.93
ZCCHC4Q9H5U6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZCCHC4Q9H5U6 AC097639.1-201ENST00000565519 1891 ntBASIC20.85■□□□□ 0.93
ZCCHC4Q9H5U6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZCCHC4Q9H5U6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZCCHC4Q9H5U6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ZCCHC4Q9H5U6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ZCCHC4Q9H5U6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZCCHC4Q9H5U6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZCCHC4Q9H5U6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZCCHC4Q9H5U6 LINC00543-201ENST00000567234 1845 ntBASIC20.84■□□□□ 0.93
ZCCHC4Q9H5U6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZCCHC4Q9H5U6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.84■□□□□ 0.93
ZCCHC4Q9H5U6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ZCCHC4Q9H5U6 AC068473.5-201ENST00000616428 2072 ntBASIC20.84■□□□□ 0.93
ZCCHC4Q9H5U6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZCCHC4Q9H5U6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.83■□□□□ 0.93
ZCCHC4Q9H5U6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.83■□□□□ 0.93
ZCCHC4Q9H5U6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
ZCCHC4Q9H5U6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZCCHC4Q9H5U6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZCCHC4Q9H5U6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZCCHC4Q9H5U6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZCCHC4Q9H5U6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZCCHC4Q9H5U6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.82■□□□□ 0.92
ZCCHC4Q9H5U6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZCCHC4Q9H5U6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZCCHC4Q9H5U6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ZCCHC4Q9H5U6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZCCHC4Q9H5U6 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.82■□□□□ 0.92
ZCCHC4Q9H5U6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZCCHC4Q9H5U6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.82■□□□□ 0.92
ZCCHC4Q9H5U6 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.82■□□□□ 0.92
ZCCHC4Q9H5U6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZCCHC4Q9H5U6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.82■□□□□ 0.92
ZCCHC4Q9H5U6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZCCHC4Q9H5U6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ZCCHC4Q9H5U6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZCCHC4Q9H5U6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms