Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LIMD2Q9BT23 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIMD2Q9BT23 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LIMD2Q9BT23 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC14.06□□□□□ -0.16
LIMD2Q9BT23 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC14.06□□□□□ -0.16
LIMD2Q9BT23 AC092803.2-201ENST00000564287 1899 ntBASIC14.06□□□□□ -0.16
LIMD2Q9BT23 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 TPT1-202ENST00000379055 948 ntTSL 2 BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 PVT1-219ENST00000523427 938 ntTSL 3 BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LIMD2Q9BT23 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC14.04□□□□□ -0.16
LIMD2Q9BT23 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LIMD2Q9BT23 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
LIMD2Q9BT23 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC14.04□□□□□ -0.16
LIMD2Q9BT23 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LIMD2Q9BT23 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC14.04□□□□□ -0.16
LIMD2Q9BT23 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LIMD2Q9BT23 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC14.04□□□□□ -0.16
LIMD2Q9BT23 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LIMD2Q9BT23 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LIMD2Q9BT23 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
LIMD2Q9BT23 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LIMD2Q9BT23 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC14.03□□□□□ -0.16
LIMD2Q9BT23 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC14.03□□□□□ -0.16
LIMD2Q9BT23 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIMD2Q9BT23 MIR639-201ENST00000384974 98 ntBASIC14.03□□□□□ -0.16
LIMD2Q9BT23 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIMD2Q9BT23 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC14.03□□□□□ -0.16
LIMD2Q9BT23 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
LIMD2Q9BT23 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIMD2Q9BT23 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIMD2Q9BT23 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
LIMD2Q9BT23 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
LIMD2Q9BT23 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIMD2Q9BT23 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LIMD2Q9BT23 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LIMD2Q9BT23 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LIMD2Q9BT23 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC14.02□□□□□ -0.16
LIMD2Q9BT23 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LIMD2Q9BT23 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LIMD2Q9BT23 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LIMD2Q9BT23 AC091060.1-201ENST00000623524 1766 ntBASIC14.02□□□□□ -0.16
LIMD2Q9BT23 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC14.02□□□□□ -0.16
LIMD2Q9BT23 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC14.02□□□□□ -0.16
LIMD2Q9BT23 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC14.02□□□□□ -0.17
LIMD2Q9BT23 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LIMD2Q9BT23 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LIMD2Q9BT23 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC14.02□□□□□ -0.17
LIMD2Q9BT23 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LIMD2Q9BT23 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIMD2Q9BT23 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIMD2Q9BT23 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LIMD2Q9BT23 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIMD2Q9BT23 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LIMD2Q9BT23 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LIMD2Q9BT23 AL359504.2-201ENST00000605506 1601 ntBASIC14.01□□□□□ -0.17
LIMD2Q9BT23 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC14□□□□□ -0.17
LIMD2Q9BT23 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LIMD2Q9BT23 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LIMD2Q9BT23 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LIMD2Q9BT23 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC14□□□□□ -0.17
LIMD2Q9BT23 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC14□□□□□ -0.17
LIMD2Q9BT23 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14□□□□□ -0.17
LIMD2Q9BT23 REST-210ENST00000638187 1334 ntTSL 5 BASIC14□□□□□ -0.17
LIMD2Q9BT23 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC14□□□□□ -0.17
LIMD2Q9BT23 DUSP8P4-201ENST00000399538 1761 ntBASIC14□□□□□ -0.17
LIMD2Q9BT23 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC14□□□□□ -0.17
LIMD2Q9BT23 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LIMD2Q9BT23 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LIMD2Q9BT23 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LIMD2Q9BT23 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LIMD2Q9BT23 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LIMD2Q9BT23 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LIMD2Q9BT23 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LIMD2Q9BT23 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LIMD2Q9BT23 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LIMD2Q9BT23 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LIMD2Q9BT23 AC012676.1-201ENST00000574705 1949 ntBASIC13.98□□□□□ -0.17
LIMD2Q9BT23 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIMD2Q9BT23 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LIMD2Q9BT23 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC13.98□□□□□ -0.17
LIMD2Q9BT23 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LIMD2Q9BT23 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIMD2Q9BT23 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC13.98□□□□□ -0.17
LIMD2Q9BT23 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIMD2Q9BT23 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIMD2Q9BT23 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms