Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 RPL7BYPL198W 735 nt5.03□□□□□ -1.6
ATG40Q99325 DUR1,2YBR208C 5508 nt5.03□□□□□ -1.6
ATG40Q99325 MCM6YGL201C 3054 nt5.02□□□□□ -1.61
ATG40Q99325 RPS5YJR123W 678 nt5.02□□□□□ -1.61
ATG40Q99325 YLR184WYLR184W 348 nt5.02□□□□□ -1.61
ATG40Q99325 NHP6BYBR089C-A 300 nt5.02□□□□□ -1.61
ATG40Q99325 RAD3YER171W 2337 nt5.02□□□□□ -1.61
ATG40Q99325 ALD6YPL061W 1503 nt5.02□□□□□ -1.61
ATG40Q99325 SUP19tS(UGA)E 82 nt5.01□□□□□ -1.61
ATG40Q99325 SUP17tS(UGA)I 82 nt5.01□□□□□ -1.61
ATG40Q99325 SUP16tS(UGA)P 82 nt5.01□□□□□ -1.61
ATG40Q99325 YNL042W-BYNL042W-B 258 nt5.01□□□□□ -1.61
ATG40Q99325 MKK1YOR231W 1527 nt5.01□□□□□ -1.61
ATG40Q99325 LDB19YOR322C 2457 nt5.01□□□□□ -1.61
ATG40Q99325 UTP4YDR324C 2331 nt5.01□□□□□ -1.61
ATG40Q99325 VMA4YOR332W 702 nt5□□□□□ -1.61
ATG40Q99325 AMA1YGR225W 1782 nt5□□□□□ -1.61
ATG40Q99325 YPK2YMR104C 2034 nt5□□□□□ -1.61
ATG40Q99325 PTK2YJR059W 2457 nt5□□□□□ -1.61
ATG40Q99325 MCM3YEL032W 2916 nt5□□□□□ -1.61
ATG40Q99325 GAT1YFL021W 1533 nt4.99□□□□□ -1.61
ATG40Q99325 POR2YIL114C 846 nt4.99□□□□□ -1.61
ATG40Q99325 GCV3YAL044C 513 nt4.99□□□□□ -1.61
ATG40Q99325 YJU3YKL094W 942 nt4.99□□□□□ -1.61
ATG40Q99325 RPL10YLR075W 666 nt4.99□□□□□ -1.61
ATG40Q99325 YPR160C-AYPR160C-A 285 nt4.99□□□□□ -1.61
ATG40Q99325 HXT15YDL245C 1704 nt4.99□□□□□ -1.61
ATG40Q99325 HXT16YJR158W 1704 nt4.99□□□□□ -1.61
ATG40Q99325 YRF1-4YLR466W 4149 nt4.99□□□□□ -1.61
ATG40Q99325 PRI2YKL045W 1587 nt4.99□□□□□ -1.61
ATG40Q99325 YFL042CYFL042C 2025 nt4.98□□□□□ -1.61
ATG40Q99325 GAL83YER027C 1254 nt4.98□□□□□ -1.61
ATG40Q99325 RME1YGR044C 903 nt4.98□□□□□ -1.61
ATG40Q99325 TAL1YLR354C 1008 nt4.98□□□□□ -1.61
ATG40Q99325 HSP78YDR258C 2436 nt4.98□□□□□ -1.61
ATG40Q99325 SKS1YPL026C 1509 nt4.97□□□□□ -1.61
ATG40Q99325 XBP1YIL101C 1944 nt4.97□□□□□ -1.61
ATG40Q99325 YER186CYER186C 921 nt4.97□□□□□ -1.61
ATG40Q99325 IMD1YAR073W 1212 nt4.97□□□□□ -1.61
ATG40Q99325 HIS7YBR248C 1659 nt4.96□□□□□ -1.61
ATG40Q99325 YER148W-AYER148W-A 579 nt4.96□□□□□ -1.62
ATG40Q99325 RPS2YGL123W 765 nt4.96□□□□□ -1.62
ATG40Q99325 BUD32YGR262C 786 nt4.96□□□□□ -1.62
ATG40Q99325 SCO2YBR024W 906 nt4.96□□□□□ -1.62
ATG40Q99325 MRPS5YBR251W 924 nt4.96□□□□□ -1.62
ATG40Q99325 PHB1YGR132C 864 nt4.95□□□□□ -1.62
ATG40Q99325 DOT5YIL010W 648 nt4.95□□□□□ -1.62
ATG40Q99325 CIN4YMR138W 576 nt4.95□□□□□ -1.62
ATG40Q99325 GIT1YCR098C 1557 nt4.95□□□□□ -1.62
ATG40Q99325 YKR023WYKR023W 1593 nt4.95□□□□□ -1.62
ATG40Q99325 STE13YOR219C 2796 nt4.94□□□□□ -1.62
ATG40Q99325 KEX2YNL238W 2445 nt4.94□□□□□ -1.62
ATG40Q99325 YBL070CYBL070C 321 nt4.94□□□□□ -1.62
ATG40Q99325 DIA3YDL024C 1407 nt4.94□□□□□ -1.62
ATG40Q99325 ADE12YNL220W 1302 nt4.94□□□□□ -1.62
ATG40Q99325 MPA43YNL249C 1629 nt4.94□□□□□ -1.62
ATG40Q99325 COX20YDR231C 618 nt4.93□□□□□ -1.62
ATG40Q99325 ERC1YHR032W 1746 nt4.93□□□□□ -1.62
ATG40Q99325 LYS12YIL094C 1116 nt4.93□□□□□ -1.62
ATG40Q99325 DJP1YIR004W 1299 nt4.93□□□□□ -1.62
ATG40Q99325 STM1YLR150W 822 nt4.93□□□□□ -1.62
ATG40Q99325 YBR124WYBR124W 360 nt4.93□□□□□ -1.62
ATG40Q99325 KSS1YGR040W 1107 nt4.92□□□□□ -1.62
ATG40Q99325 MOG1YJR074W 657 nt4.92□□□□□ -1.62
ATG40Q99325 ZRT2YLR130C 1269 nt4.92□□□□□ -1.62
ATG40Q99325 YML012C-AYML012C-A 378 nt4.92□□□□□ -1.62
ATG40Q99325 YOL131WYOL131W 327 nt4.92□□□□□ -1.62
ATG40Q99325 UBC11YOR339C 471 nt4.92□□□□□ -1.62
ATG40Q99325 HSP104YLL026W 2727 nt4.92□□□□□ -1.62
ATG40Q99325 MKK2YPL140C 1521 nt4.92□□□□□ -1.62
ATG40Q99325 PYC1YGL062W 3537 nt4.92□□□□□ -1.62
ATG40Q99325 ATP1YBL099W 1638 nt4.91□□□□□ -1.62
ATG40Q99325 APE3YBR286W 1614 nt4.91□□□□□ -1.62
ATG40Q99325 YDL057WYDL057W 987 nt4.91□□□□□ -1.62
ATG40Q99325 CHO1YER026C 831 nt4.91□□□□□ -1.62
ATG40Q99325 MLC2YPR188C 492 nt4.91□□□□□ -1.62
ATG40Q99325 VRP1YLR337C 2454 nt4.91□□□□□ -1.62
ATG40Q99325 GPA2YER020W 1350 nt4.91□□□□□ -1.62
ATG40Q99325 YDR109CYDR109C 2148 nt4.9□□□□□ -1.62
ATG40Q99325 IDP1YDL066W 1287 nt4.9□□□□□ -1.63
ATG40Q99325 NPA3YJR072C 1158 nt4.9□□□□□ -1.63
ATG40Q99325 RHO4YKR055W 876 nt4.9□□□□□ -1.63
ATG40Q99325 YBR144CYBR144C 315 nt4.9□□□□□ -1.63
ATG40Q99325 CLB1YGR108W 1416 nt4.89□□□□□ -1.63
ATG40Q99325 YEH1YLL012W 1722 nt4.89□□□□□ -1.63
ATG40Q99325 HIR1YBL008W 2523 nt4.89□□□□□ -1.63
ATG40Q99325 SCT1YBL011W 2280 nt4.89□□□□□ -1.63
ATG40Q99325 MRP51YPL118W 1035 nt4.89□□□□□ -1.63
ATG40Q99325 TNA1YGR260W 1605 nt4.89□□□□□ -1.63
ATG40Q99325 GUA1YMR217W 1578 nt4.88□□□□□ -1.63
ATG40Q99325 MID1YNL291C 1647 nt4.88□□□□□ -1.63
ATG40Q99325 SNZ3YFL059W 897 nt4.88□□□□□ -1.63
ATG40Q99325 SNZ2YNL333W 897 nt4.88□□□□□ -1.63
ATG40Q99325 VNX1YNL321W 2727 nt4.88□□□□□ -1.63
ATG40Q99325 TRP3YKL211C 1455 nt4.88□□□□□ -1.63
ATG40Q99325 SGV1YPR161C 1974 nt4.87□□□□□ -1.63
ATG40Q99325 GLE1YDL207W 1617 nt4.87□□□□□ -1.63
ATG40Q99325 HXT17YNR072W 1695 nt4.87□□□□□ -1.63
ATG40Q99325 PRE3YJL001W 648 nt4.87□□□□□ -1.63
ATG40Q99325 PFA3YNL326C 1011 nt4.87□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms