Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00479Q96M42 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00479Q96M42 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LINC00479Q96M42 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00479Q96M42 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.16■□□□□ 0.5
LINC00479Q96M42 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00479Q96M42 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00479Q96M42 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC00479Q96M42 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC00479Q96M42 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LINC00479Q96M42 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00479Q96M42 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00479Q96M42 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LINC00479Q96M42 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.15■□□□□ 0.5
LINC00479Q96M42 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00479Q96M42 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC00479Q96M42 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00479Q96M42 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00479Q96M42 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00479Q96M42 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00479Q96M42 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00479Q96M42 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LINC00479Q96M42 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LINC00479Q96M42 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC00479Q96M42 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00479Q96M42 AC087741.3-201ENST00000624270 1347 ntBASIC18.14■□□□□ 0.49
LINC00479Q96M42 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LINC00479Q96M42 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LINC00479Q96M42 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.13■□□□□ 0.49
LINC00479Q96M42 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00479Q96M42 SLC6A10P-202ENST00000431994 2058 ntBASIC18.13■□□□□ 0.49
LINC00479Q96M42 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00479Q96M42 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LINC00479Q96M42 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00479Q96M42 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LINC00479Q96M42 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00479Q96M42 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00479Q96M42 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LINC00479Q96M42 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00479Q96M42 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00479Q96M42 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00479Q96M42 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00479Q96M42 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00479Q96M42 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LINC00479Q96M42 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LINC00479Q96M42 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.12■□□□□ 0.49
LINC00479Q96M42 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00479Q96M42 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00479Q96M42 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC00479Q96M42 LINC00543-201ENST00000567234 1845 ntBASIC18.12■□□□□ 0.49
LINC00479Q96M42 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00479Q96M42 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00479Q96M42 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.11■□□□□ 0.49
LINC00479Q96M42 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LINC00479Q96M42 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00479Q96M42 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.1■□□□□ 0.49
LINC00479Q96M42 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00479Q96M42 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00479Q96M42 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00479Q96M42 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LINC00479Q96M42 AC021231.2-201ENST00000594613 730 ntBASIC18.1■□□□□ 0.49
LINC00479Q96M42 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00479Q96M42 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00479Q96M42 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00479Q96M42 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00479Q96M42 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00479Q96M42 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00479Q96M42 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LINC00479Q96M42 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC00479Q96M42 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00479Q96M42 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00479Q96M42 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00479Q96M42 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00479Q96M42 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.09■□□□□ 0.49
LINC00479Q96M42 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00479Q96M42 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00479Q96M42 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00479Q96M42 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00479Q96M42 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.08■□□□□ 0.48
LINC00479Q96M42 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.08■□□□□ 0.48
LINC00479Q96M42 AL359504.2-201ENST00000605506 1601 ntBASIC18.08■□□□□ 0.48
LINC00479Q96M42 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
LINC00479Q96M42 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LINC00479Q96M42 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00479Q96M42 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00479Q96M42 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00479Q96M42 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.07■□□□□ 0.48
LINC00479Q96M42 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00479Q96M42 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00479Q96M42 AP006261.1-201ENST00000584783 668 ntBASIC18.07■□□□□ 0.48
LINC00479Q96M42 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00479Q96M42 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00479Q96M42 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LINC00479Q96M42 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
LINC00479Q96M42 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00479Q96M42 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00479Q96M42 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00479Q96M42 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00479Q96M42 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.06■□□□□ 0.48
LINC00479Q96M42 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms