Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RITA1Q96K30 AL592293.1-201ENST00000502889 1188 ntBASIC19.2■□□□□ 0.66
RITA1Q96K30 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RITA1Q96K30 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RITA1Q96K30 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RITA1Q96K30 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RITA1Q96K30 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RITA1Q96K30 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.19■□□□□ 0.66
RITA1Q96K30 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RITA1Q96K30 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RITA1Q96K30 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.19■□□□□ 0.66
RITA1Q96K30 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RITA1Q96K30 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.19■□□□□ 0.66
RITA1Q96K30 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.19■□□□□ 0.66
RITA1Q96K30 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.19■□□□□ 0.66
RITA1Q96K30 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RITA1Q96K30 AC097639.1-201ENST00000565519 1891 ntBASIC19.19■□□□□ 0.66
RITA1Q96K30 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.19■□□□□ 0.66
RITA1Q96K30 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.19■□□□□ 0.66
RITA1Q96K30 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RITA1Q96K30 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RITA1Q96K30 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RITA1Q96K30 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
RITA1Q96K30 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RITA1Q96K30 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RITA1Q96K30 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RITA1Q96K30 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RITA1Q96K30 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RITA1Q96K30 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.18■□□□□ 0.66
RITA1Q96K30 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RITA1Q96K30 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RITA1Q96K30 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RITA1Q96K30 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RITA1Q96K30 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RITA1Q96K30 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.17■□□□□ 0.66
RITA1Q96K30 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RITA1Q96K30 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
RITA1Q96K30 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RITA1Q96K30 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RITA1Q96K30 SPCS2P3-201ENST00000500401 656 ntBASIC19.16■□□□□ 0.66
RITA1Q96K30 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.16■□□□□ 0.66
RITA1Q96K30 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RITA1Q96K30 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RITA1Q96K30 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RITA1Q96K30 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RITA1Q96K30 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.16■□□□□ 0.66
RITA1Q96K30 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RITA1Q96K30 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RITA1Q96K30 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RITA1Q96K30 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RITA1Q96K30 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RITA1Q96K30 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.15■□□□□ 0.66
RITA1Q96K30 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RITA1Q96K30 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RITA1Q96K30 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RITA1Q96K30 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RITA1Q96K30 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
RITA1Q96K30 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RITA1Q96K30 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.14■□□□□ 0.65
RITA1Q96K30 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RITA1Q96K30 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RITA1Q96K30 AC135731.1-201ENST00000569415 2548 ntBASIC19.14■□□□□ 0.65
RITA1Q96K30 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RITA1Q96K30 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RITA1Q96K30 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RITA1Q96K30 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
RITA1Q96K30 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
RITA1Q96K30 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RITA1Q96K30 AC022211.4-201ENST00000625094 2161 ntBASIC19.13■□□□□ 0.65
RITA1Q96K30 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
RITA1Q96K30 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RITA1Q96K30 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RITA1Q96K30 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RITA1Q96K30 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RITA1Q96K30 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.12■□□□□ 0.65
RITA1Q96K30 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.12■□□□□ 0.65
RITA1Q96K30 SLC6A10P-202ENST00000431994 2058 ntBASIC19.12■□□□□ 0.65
RITA1Q96K30 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RITA1Q96K30 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RITA1Q96K30 KRT18P60-201ENST00000312876 1297 ntBASIC19.12■□□□□ 0.65
RITA1Q96K30 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RITA1Q96K30 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.12■□□□□ 0.65
RITA1Q96K30 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.12■□□□□ 0.65
RITA1Q96K30 ABHD17AP5-201ENST00000580133 923 ntBASIC19.12■□□□□ 0.65
RITA1Q96K30 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RITA1Q96K30 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
RITA1Q96K30 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RITA1Q96K30 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RITA1Q96K30 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.11■□□□□ 0.65
RITA1Q96K30 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RITA1Q96K30 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RITA1Q96K30 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RITA1Q96K30 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RITA1Q96K30 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RITA1Q96K30 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RITA1Q96K30 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RITA1Q96K30 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.1■□□□□ 0.65
RITA1Q96K30 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RITA1Q96K30 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
RITA1Q96K30 DUX4L9-201ENST00000449051 1259 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms