Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.52■□□□□ 0.88
SPG11Q96JI7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPG11Q96JI7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPG11Q96JI7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPG11Q96JI7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPG11Q96JI7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPG11Q96JI7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPG11Q96JI7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.51■□□□□ 0.87
SPG11Q96JI7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.51■□□□□ 0.87
SPG11Q96JI7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.51■□□□□ 0.87
SPG11Q96JI7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPG11Q96JI7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPG11Q96JI7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.51■□□□□ 0.87
SPG11Q96JI7 AL512631.2-201ENST00000604634 923 ntBASIC20.51■□□□□ 0.87
SPG11Q96JI7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.5■□□□□ 0.87
SPG11Q96JI7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.5■□□□□ 0.87
SPG11Q96JI7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SPG11Q96JI7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.5■□□□□ 0.87
SPG11Q96JI7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.5■□□□□ 0.87
SPG11Q96JI7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SPG11Q96JI7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPG11Q96JI7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.49■□□□□ 0.87
SPG11Q96JI7 AC010997.5-201ENST00000609182 354 ntBASIC20.49■□□□□ 0.87
SPG11Q96JI7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPG11Q96JI7 BX255925.1-201ENST00000566954 1854 ntBASIC20.49■□□□□ 0.87
SPG11Q96JI7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.48■□□□□ 0.87
SPG11Q96JI7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPG11Q96JI7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
SPG11Q96JI7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.48■□□□□ 0.87
SPG11Q96JI7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPG11Q96JI7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.48■□□□□ 0.87
SPG11Q96JI7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SPG11Q96JI7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPG11Q96JI7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SPG11Q96JI7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPG11Q96JI7 MIR6724-1-201ENST00000616420 92 ntBASIC20.47■□□□□ 0.87
SPG11Q96JI7 MIR6724-2-201ENST00000616483 92 ntBASIC20.47■□□□□ 0.87
SPG11Q96JI7 MIR6724-4-201ENST00000617390 92 ntBASIC20.47■□□□□ 0.87
SPG11Q96JI7 MIR6724-3-201ENST00000622482 92 ntBASIC20.47■□□□□ 0.87
SPG11Q96JI7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.47■□□□□ 0.87
SPG11Q96JI7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPG11Q96JI7 AC104564.3-201ENST00000582367 638 ntBASIC20.47■□□□□ 0.87
SPG11Q96JI7 AC106739.1-201ENST00000617035 715 ntBASIC20.47■□□□□ 0.87
SPG11Q96JI7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
SPG11Q96JI7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPG11Q96JI7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SPG11Q96JI7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.46■□□□□ 0.87
SPG11Q96JI7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPG11Q96JI7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.46■□□□□ 0.87
SPG11Q96JI7 AL449106.1-201ENST00000608517 1980 ntBASIC20.46■□□□□ 0.87
SPG11Q96JI7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPG11Q96JI7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.46■□□□□ 0.87
SPG11Q96JI7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SPG11Q96JI7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPG11Q96JI7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.45■□□□□ 0.86
SPG11Q96JI7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPG11Q96JI7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.45■□□□□ 0.86
SPG11Q96JI7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SPG11Q96JI7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SPG11Q96JI7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SPG11Q96JI7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPG11Q96JI7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SPG11Q96JI7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.44■□□□□ 0.86
SPG11Q96JI7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.44■□□□□ 0.86
SPG11Q96JI7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
SPG11Q96JI7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SPG11Q96JI7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SPG11Q96JI7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SPG11Q96JI7 MIR5787-201ENST00000611784 55 ntBASIC20.43■□□□□ 0.86
SPG11Q96JI7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SPG11Q96JI7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SPG11Q96JI7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SPG11Q96JI7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SPG11Q96JI7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.43■□□□□ 0.86
SPG11Q96JI7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
SPG11Q96JI7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPG11Q96JI7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.42■□□□□ 0.86
SPG11Q96JI7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPG11Q96JI7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SPG11Q96JI7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
SPG11Q96JI7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SPG11Q96JI7 AL031432.3-201ENST00000607698 485 ntBASIC20.42■□□□□ 0.86
SPG11Q96JI7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPG11Q96JI7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPG11Q96JI7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.41■□□□□ 0.86
SPG11Q96JI7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPG11Q96JI7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.41■□□□□ 0.86
SPG11Q96JI7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SPG11Q96JI7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPG11Q96JI7 MTDHP2-201ENST00000601468 714 ntBASIC20.4■□□□□ 0.86
SPG11Q96JI7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPG11Q96JI7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.4■□□□□ 0.86
SPG11Q96JI7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPG11Q96JI7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPG11Q96JI7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.39■□□□□ 0.86
SPG11Q96JI7 AC142381.2-201ENST00000566120 298 ntBASIC20.39■□□□□ 0.86
SPG11Q96JI7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPG11Q96JI7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.39■□□□□ 0.85
SPG11Q96JI7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPG11Q96JI7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms