Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
STAG1Q8WVM7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.34■■■□□ 2.13
STAG1Q8WVM7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
STAG1Q8WVM7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
STAG1Q8WVM7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
STAG1Q8WVM7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
STAG1Q8WVM7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.32■■■□□ 2.12
STAG1Q8WVM7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC28.32■■■□□ 2.12
STAG1Q8WVM7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
STAG1Q8WVM7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.31■■■□□ 2.12
STAG1Q8WVM7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
STAG1Q8WVM7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
STAG1Q8WVM7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
STAG1Q8WVM7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.29■■■□□ 2.12
STAG1Q8WVM7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
STAG1Q8WVM7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
STAG1Q8WVM7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
STAG1Q8WVM7 RARRES2P1-201ENST00000474487 481 ntBASIC28.29■■■□□ 2.12
STAG1Q8WVM7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
STAG1Q8WVM7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
STAG1Q8WVM7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.28■■■□□ 2.12
STAG1Q8WVM7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
STAG1Q8WVM7 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.28■■■□□ 2.12
STAG1Q8WVM7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
STAG1Q8WVM7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
STAG1Q8WVM7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
STAG1Q8WVM7 BHLHE23-202ENST00000612929 1109 ntBASIC28.27■■■□□ 2.12
STAG1Q8WVM7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.26■■■□□ 2.12
STAG1Q8WVM7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
STAG1Q8WVM7 AC139795.1-202ENST00000500444 432 ntBASIC28.26■■■□□ 2.11
STAG1Q8WVM7 AC074183.2-201ENST00000623112 922 ntBASIC28.26■■■□□ 2.11
STAG1Q8WVM7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
STAG1Q8WVM7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
STAG1Q8WVM7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
STAG1Q8WVM7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
STAG1Q8WVM7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.25■■■□□ 2.11
STAG1Q8WVM7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.25■■■□□ 2.11
STAG1Q8WVM7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
STAG1Q8WVM7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
STAG1Q8WVM7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
STAG1Q8WVM7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
STAG1Q8WVM7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.24■■■□□ 2.11
STAG1Q8WVM7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
STAG1Q8WVM7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
STAG1Q8WVM7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
STAG1Q8WVM7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
STAG1Q8WVM7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.23■■■□□ 2.11
STAG1Q8WVM7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
STAG1Q8WVM7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
STAG1Q8WVM7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
STAG1Q8WVM7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
STAG1Q8WVM7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.23■■■□□ 2.11
STAG1Q8WVM7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
STAG1Q8WVM7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
STAG1Q8WVM7 AC097639.1-201ENST00000565519 1891 ntBASIC28.23■■■□□ 2.11
STAG1Q8WVM7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
STAG1Q8WVM7 LONRF2P2-201ENST00000439212 571 ntBASIC28.22■■■□□ 2.11
STAG1Q8WVM7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC28.22■■■□□ 2.11
STAG1Q8WVM7 AC010980.1-201ENST00000587192 1142 ntBASIC28.22■■■□□ 2.11
STAG1Q8WVM7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
STAG1Q8WVM7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
STAG1Q8WVM7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
STAG1Q8WVM7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.21■■■□□ 2.11
STAG1Q8WVM7 PVT1_1.1-201ENST00000615125 194 ntBASIC28.21■■■□□ 2.11
STAG1Q8WVM7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
STAG1Q8WVM7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
STAG1Q8WVM7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
STAG1Q8WVM7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC28.2■■■□□ 2.1
STAG1Q8WVM7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
STAG1Q8WVM7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.2■■■□□ 2.1
STAG1Q8WVM7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC28.2■■■□□ 2.1
STAG1Q8WVM7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
STAG1Q8WVM7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
STAG1Q8WVM7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.2■■■□□ 2.1
STAG1Q8WVM7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
STAG1Q8WVM7 AC019171.1-201ENST00000601251 1056 ntBASIC28.19■■■□□ 2.1
STAG1Q8WVM7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
STAG1Q8WVM7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
STAG1Q8WVM7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.18■■■□□ 2.1
STAG1Q8WVM7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
STAG1Q8WVM7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
STAG1Q8WVM7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
STAG1Q8WVM7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
STAG1Q8WVM7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
STAG1Q8WVM7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.17■■■□□ 2.1
STAG1Q8WVM7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.17■■■□□ 2.1
STAG1Q8WVM7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
STAG1Q8WVM7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.17■■■□□ 2.1
STAG1Q8WVM7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
STAG1Q8WVM7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.17■■■□□ 2.1
STAG1Q8WVM7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC28.17■■■□□ 2.1
STAG1Q8WVM7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.17■■■□□ 2.1
STAG1Q8WVM7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
STAG1Q8WVM7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
STAG1Q8WVM7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
STAG1Q8WVM7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.15■■■□□ 2.1
STAG1Q8WVM7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.15■■■□□ 2.1
STAG1Q8WVM7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
STAG1Q8WVM7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
STAG1Q8WVM7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms