Protein–RNA interactions for Protein: Q8WVK2

SNRNP27, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, humanhuman

Known RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27Q8WVK2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNRNP27Q8WVK2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.15■■□□□ 1.3
SNRNP27Q8WVK2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNRNP27Q8WVK2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.15■■□□□ 1.3
SNRNP27Q8WVK2 AC019171.1-201ENST00000601251 1056 ntBASIC23.15■■□□□ 1.3
SNRNP27Q8WVK2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SNRNP27Q8WVK2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.15■■□□□ 1.3
SNRNP27Q8WVK2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SNRNP27Q8WVK2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.15■■□□□ 1.3
SNRNP27Q8WVK2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNRNP27Q8WVK2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNRNP27Q8WVK2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
SNRNP27Q8WVK2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
SNRNP27Q8WVK2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
SNRNP27Q8WVK2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.29
SNRNP27Q8WVK2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
SNRNP27Q8WVK2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SNRNP27Q8WVK2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SNRNP27Q8WVK2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SNRNP27Q8WVK2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SNRNP27Q8WVK2 AP004833.2-201ENST00000532228 1454 ntBASIC23.12■■□□□ 1.29
SNRNP27Q8WVK2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNRNP27Q8WVK2 Z92544.1-202ENST00000571933 1220 ntBASIC23.12■■□□□ 1.29
SNRNP27Q8WVK2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.12■■□□□ 1.29
SNRNP27Q8WVK2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.12■■□□□ 1.29
SNRNP27Q8WVK2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNRNP27Q8WVK2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNRNP27Q8WVK2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNRNP27Q8WVK2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNRNP27Q8WVK2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNRNP27Q8WVK2 AC008406.3-201ENST00000620001 1374 ntBASIC23.1■■□□□ 1.29
SNRNP27Q8WVK2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SNRNP27Q8WVK2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNRNP27Q8WVK2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.09■■□□□ 1.29
SNRNP27Q8WVK2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNRNP27Q8WVK2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.08■■□□□ 1.29
SNRNP27Q8WVK2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.08■■□□□ 1.29
SNRNP27Q8WVK2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
SNRNP27Q8WVK2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP27Q8WVK2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP27Q8WVK2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP27Q8WVK2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP27Q8WVK2 AC239859.2-201ENST00000444165 318 ntBASIC23.07■■□□□ 1.28
SNRNP27Q8WVK2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP27Q8WVK2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SNRNP27Q8WVK2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.07■■□□□ 1.28
SNRNP27Q8WVK2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP27Q8WVK2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.06■■□□□ 1.28
SNRNP27Q8WVK2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.06■■□□□ 1.28
SNRNP27Q8WVK2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.06■■□□□ 1.28
SNRNP27Q8WVK2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNRNP27Q8WVK2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SNRNP27Q8WVK2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNRNP27Q8WVK2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNRNP27Q8WVK2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNRNP27Q8WVK2 DRD5P2-201ENST00000421395 2012 ntBASIC23.05■■□□□ 1.28
SNRNP27Q8WVK2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNRNP27Q8WVK2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.05■■□□□ 1.28
SNRNP27Q8WVK2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNRNP27Q8WVK2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNRNP27Q8WVK2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.04■■□□□ 1.28
SNRNP27Q8WVK2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.04■■□□□ 1.28
SNRNP27Q8WVK2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNRNP27Q8WVK2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
SNRNP27Q8WVK2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNRNP27Q8WVK2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNRNP27Q8WVK2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNRNP27Q8WVK2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNRNP27Q8WVK2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNRNP27Q8WVK2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.03■■□□□ 1.28
SNRNP27Q8WVK2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.03■■□□□ 1.28
SNRNP27Q8WVK2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SNRNP27Q8WVK2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNRNP27Q8WVK2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNRNP27Q8WVK2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNRNP27Q8WVK2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNRNP27Q8WVK2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP27Q8WVK2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
SNRNP27Q8WVK2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.02■■□□□ 1.28
SNRNP27Q8WVK2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.02■■□□□ 1.28
SNRNP27Q8WVK2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.02■■□□□ 1.28
SNRNP27Q8WVK2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.02■■□□□ 1.28
SNRNP27Q8WVK2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP27Q8WVK2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.02■■□□□ 1.28
SNRNP27Q8WVK2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
SNRNP27Q8WVK2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNRNP27Q8WVK2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNRNP27Q8WVK2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.01■■□□□ 1.27
SNRNP27Q8WVK2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNRNP27Q8WVK2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNRNP27Q8WVK2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.01■■□□□ 1.27
SNRNP27Q8WVK2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
SNRNP27Q8WVK2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.01■■□□□ 1.27
SNRNP27Q8WVK2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SNRNP27Q8WVK2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23■■□□□ 1.27
SNRNP27Q8WVK2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
SNRNP27Q8WVK2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23■■□□□ 1.27
SNRNP27Q8WVK2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SNRNP27Q8WVK2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SNRNP27Q8WVK2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms