Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS4Y2Q8TD47 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS4Y2Q8TD47 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.94■□□□□ 0.94
RPS4Y2Q8TD47 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4Y2Q8TD47 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4Y2Q8TD47 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RPS4Y2Q8TD47 LINC00543-201ENST00000567234 1845 ntBASIC20.94■□□□□ 0.94
RPS4Y2Q8TD47 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4Y2Q8TD47 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.93■□□□□ 0.94
RPS4Y2Q8TD47 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4Y2Q8TD47 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4Y2Q8TD47 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4Y2Q8TD47 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.93■□□□□ 0.94
RPS4Y2Q8TD47 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4Y2Q8TD47 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RPS4Y2Q8TD47 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPS4Y2Q8TD47 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPS4Y2Q8TD47 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.92■□□□□ 0.94
RPS4Y2Q8TD47 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS4Y2Q8TD47 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.92■□□□□ 0.94
RPS4Y2Q8TD47 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.92■□□□□ 0.94
RPS4Y2Q8TD47 DUX4L11-201ENST00000611504 1267 ntBASIC20.92■□□□□ 0.94
RPS4Y2Q8TD47 DUX4L12-201ENST00000614593 1267 ntBASIC20.92■□□□□ 0.94
RPS4Y2Q8TD47 DUX4L14-201ENST00000621227 1267 ntBASIC20.92■□□□□ 0.94
RPS4Y2Q8TD47 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS4Y2Q8TD47 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RPS4Y2Q8TD47 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPS4Y2Q8TD47 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RPS4Y2Q8TD47 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
RPS4Y2Q8TD47 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPS4Y2Q8TD47 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.91■□□□□ 0.94
RPS4Y2Q8TD47 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPS4Y2Q8TD47 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.91■□□□□ 0.94
RPS4Y2Q8TD47 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.91■□□□□ 0.94
RPS4Y2Q8TD47 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4Y2Q8TD47 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4Y2Q8TD47 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4Y2Q8TD47 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4Y2Q8TD47 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4Y2Q8TD47 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.9■□□□□ 0.94
RPS4Y2Q8TD47 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
RPS4Y2Q8TD47 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPS4Y2Q8TD47 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPS4Y2Q8TD47 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.89■□□□□ 0.93
RPS4Y2Q8TD47 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RPS4Y2Q8TD47 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPS4Y2Q8TD47 AC141586.4-201ENST00000624558 1573 ntBASIC20.89■□□□□ 0.93
RPS4Y2Q8TD47 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RPS4Y2Q8TD47 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4Y2Q8TD47 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4Y2Q8TD47 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4Y2Q8TD47 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.88■□□□□ 0.93
RPS4Y2Q8TD47 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4Y2Q8TD47 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4Y2Q8TD47 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4Y2Q8TD47 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.88■□□□□ 0.93
RPS4Y2Q8TD47 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4Y2Q8TD47 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4Y2Q8TD47 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4Y2Q8TD47 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4Y2Q8TD47 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.87■□□□□ 0.93
RPS4Y2Q8TD47 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4Y2Q8TD47 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4Y2Q8TD47 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4Y2Q8TD47 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4Y2Q8TD47 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4Y2Q8TD47 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4Y2Q8TD47 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4Y2Q8TD47 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4Y2Q8TD47 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4Y2Q8TD47 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4Y2Q8TD47 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4Y2Q8TD47 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4Y2Q8TD47 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.86■□□□□ 0.93
RPS4Y2Q8TD47 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4Y2Q8TD47 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4Y2Q8TD47 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4Y2Q8TD47 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.85■□□□□ 0.93
RPS4Y2Q8TD47 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4Y2Q8TD47 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4Y2Q8TD47 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RPS4Y2Q8TD47 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4Y2Q8TD47 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4Y2Q8TD47 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4Y2Q8TD47 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPS4Y2Q8TD47 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPS4Y2Q8TD47 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS4Y2Q8TD47 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS4Y2Q8TD47 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.84■□□□□ 0.93
RPS4Y2Q8TD47 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS4Y2Q8TD47 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RPS4Y2Q8TD47 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
RPS4Y2Q8TD47 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPS4Y2Q8TD47 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPS4Y2Q8TD47 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPS4Y2Q8TD47 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RPS4Y2Q8TD47 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RPS4Y2Q8TD47 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPS4Y2Q8TD47 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RPS4Y2Q8TD47 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms