Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LSMEM1Q8N8F7 AC142381.3-201ENST00000568208 1670 ntBASIC21.86■■□□□ 1.09
LSMEM1Q8N8F7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
LSMEM1Q8N8F7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LSMEM1Q8N8F7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.86■■□□□ 1.09
LSMEM1Q8N8F7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.86■■□□□ 1.09
LSMEM1Q8N8F7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LSMEM1Q8N8F7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
LSMEM1Q8N8F7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
LSMEM1Q8N8F7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.85■■□□□ 1.09
LSMEM1Q8N8F7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LSMEM1Q8N8F7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LSMEM1Q8N8F7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
LSMEM1Q8N8F7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.84■■□□□ 1.09
LSMEM1Q8N8F7 GPX1-201ENST00000419349 1106 ntBASIC21.84■■□□□ 1.09
LSMEM1Q8N8F7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.84■■□□□ 1.09
LSMEM1Q8N8F7 AC007029.1-201ENST00000604183 313 ntBASIC21.84■■□□□ 1.09
LSMEM1Q8N8F7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.84■■□□□ 1.09
LSMEM1Q8N8F7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LSMEM1Q8N8F7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LSMEM1Q8N8F7 AC022211.4-201ENST00000625094 2161 ntBASIC21.84■■□□□ 1.09
LSMEM1Q8N8F7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LSMEM1Q8N8F7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LSMEM1Q8N8F7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.83■■□□□ 1.09
LSMEM1Q8N8F7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LSMEM1Q8N8F7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
LSMEM1Q8N8F7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LSMEM1Q8N8F7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LSMEM1Q8N8F7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LSMEM1Q8N8F7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LSMEM1Q8N8F7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
LSMEM1Q8N8F7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.82■■□□□ 1.08
LSMEM1Q8N8F7 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.82■■□□□ 1.08
LSMEM1Q8N8F7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LSMEM1Q8N8F7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSMEM1Q8N8F7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
LSMEM1Q8N8F7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSMEM1Q8N8F7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSMEM1Q8N8F7 AC093536.1-201ENST00000569153 554 ntBASIC21.81■■□□□ 1.08
LSMEM1Q8N8F7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LSMEM1Q8N8F7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSMEM1Q8N8F7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSMEM1Q8N8F7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LSMEM1Q8N8F7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
LSMEM1Q8N8F7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LSMEM1Q8N8F7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
LSMEM1Q8N8F7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.8■■□□□ 1.08
LSMEM1Q8N8F7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSMEM1Q8N8F7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSMEM1Q8N8F7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSMEM1Q8N8F7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSMEM1Q8N8F7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSMEM1Q8N8F7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSMEM1Q8N8F7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.79■■□□□ 1.08
LSMEM1Q8N8F7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.79■■□□□ 1.08
LSMEM1Q8N8F7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSMEM1Q8N8F7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.79■■□□□ 1.08
LSMEM1Q8N8F7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.79■■□□□ 1.08
LSMEM1Q8N8F7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
LSMEM1Q8N8F7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.79■■□□□ 1.08
LSMEM1Q8N8F7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSMEM1Q8N8F7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LSMEM1Q8N8F7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
LSMEM1Q8N8F7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSMEM1Q8N8F7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.79■■□□□ 1.08
LSMEM1Q8N8F7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSMEM1Q8N8F7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSMEM1Q8N8F7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LSMEM1Q8N8F7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LSMEM1Q8N8F7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSMEM1Q8N8F7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSMEM1Q8N8F7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LSMEM1Q8N8F7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.77■■□□□ 1.08
LSMEM1Q8N8F7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LSMEM1Q8N8F7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LSMEM1Q8N8F7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LSMEM1Q8N8F7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LSMEM1Q8N8F7 RAP2CP1-202ENST00000605179 643 ntBASIC21.76■■□□□ 1.07
LSMEM1Q8N8F7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LSMEM1Q8N8F7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.75■■□□□ 1.07
LSMEM1Q8N8F7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.75■■□□□ 1.07
LSMEM1Q8N8F7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
LSMEM1Q8N8F7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LSMEM1Q8N8F7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.75■■□□□ 1.07
LSMEM1Q8N8F7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LSMEM1Q8N8F7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LSMEM1Q8N8F7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LSMEM1Q8N8F7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LSMEM1Q8N8F7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LSMEM1Q8N8F7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.74■■□□□ 1.07
LSMEM1Q8N8F7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LSMEM1Q8N8F7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
LSMEM1Q8N8F7 SLC6A10P-202ENST00000431994 2058 ntBASIC21.74■■□□□ 1.07
LSMEM1Q8N8F7 AC138932.3-201ENST00000567634 1902 ntBASIC21.74■■□□□ 1.07
LSMEM1Q8N8F7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.73■■□□□ 1.07
LSMEM1Q8N8F7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LSMEM1Q8N8F7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LSMEM1Q8N8F7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LSMEM1Q8N8F7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.73■■□□□ 1.07
LSMEM1Q8N8F7 AC026202.3-201ENST00000600805 1127 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms