Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.18□□□□□ -0.3
RNF213Q63HN8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RNF213Q63HN8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
RNF213Q63HN8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF213Q63HN8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF213Q63HN8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.17□□□□□ -0.3
RNF213Q63HN8 AC241377.3-202ENST00000626088 1088 ntBASIC13.17□□□□□ -0.3
RNF213Q63HN8 AC241585.3-202ENST00000628937 1088 ntBASIC13.17□□□□□ -0.3
RNF213Q63HN8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC13.16□□□□□ -0.3
RNF213Q63HN8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF213Q63HN8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RNF213Q63HN8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF213Q63HN8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF213Q63HN8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF213Q63HN8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF213Q63HN8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC13.16□□□□□ -0.3
RNF213Q63HN8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF213Q63HN8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.16□□□□□ -0.3
RNF213Q63HN8 RASA4CP-201ENST00000424092 1398 ntBASIC13.16□□□□□ -0.3
RNF213Q63HN8 AC034268.1-201ENST00000441047 882 ntBASIC13.16□□□□□ -0.3
RNF213Q63HN8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF213Q63HN8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.15□□□□□ -0.3
RNF213Q63HN8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RNF213Q63HN8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC13.15□□□□□ -0.3
RNF213Q63HN8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF213Q63HN8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF213Q63HN8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF213Q63HN8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF213Q63HN8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.15□□□□□ -0.31
RNF213Q63HN8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
RNF213Q63HN8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.14□□□□□ -0.31
RNF213Q63HN8 AC091305.1-201ENST00000479476 895 ntBASIC13.14□□□□□ -0.31
RNF213Q63HN8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF213Q63HN8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.14□□□□□ -0.31
RNF213Q63HN8 TMEM191A-211ENST00000637163 1067 ntBASIC13.14□□□□□ -0.31
RNF213Q63HN8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF213Q63HN8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
RNF213Q63HN8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
RNF213Q63HN8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.13□□□□□ -0.31
RNF213Q63HN8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.13□□□□□ -0.31
RNF213Q63HN8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.13□□□□□ -0.31
RNF213Q63HN8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
RNF213Q63HN8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RNF213Q63HN8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RNF213Q63HN8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RNF213Q63HN8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.13□□□□□ -0.31
RNF213Q63HN8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC13.13□□□□□ -0.31
RNF213Q63HN8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RNF213Q63HN8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC13.13□□□□□ -0.31
RNF213Q63HN8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
RNF213Q63HN8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
RNF213Q63HN8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC13.12□□□□□ -0.31
RNF213Q63HN8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.12□□□□□ -0.31
RNF213Q63HN8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RNF213Q63HN8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.12□□□□□ -0.31
RNF213Q63HN8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC13.12□□□□□ -0.31
RNF213Q63HN8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RNF213Q63HN8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.12□□□□□ -0.31
RNF213Q63HN8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.12□□□□□ -0.31
RNF213Q63HN8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
RNF213Q63HN8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.11□□□□□ -0.31
RNF213Q63HN8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF213Q63HN8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC13.11□□□□□ -0.31
RNF213Q63HN8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RNF213Q63HN8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RNF213Q63HN8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF213Q63HN8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF213Q63HN8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC13.11□□□□□ -0.31
RNF213Q63HN8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
RNF213Q63HN8 AC120024.1-201ENST00000562672 995 ntBASIC13.1□□□□□ -0.31
RNF213Q63HN8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF213Q63HN8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF213Q63HN8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF213Q63HN8 IRS3P-201ENST00000223076 1006 ntBASIC13.1□□□□□ -0.31
RNF213Q63HN8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC13.1□□□□□ -0.31
RNF213Q63HN8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.1□□□□□ -0.31
RNF213Q63HN8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF213Q63HN8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF213Q63HN8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF213Q63HN8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF213Q63HN8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF213Q63HN8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.1□□□□□ -0.31
RNF213Q63HN8 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.1□□□□□ -0.31
RNF213Q63HN8 RAP2CP1-201ENST00000605103 478 ntBASIC13.1□□□□□ -0.31
RNF213Q63HN8 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.1□□□□□ -0.31
RNF213Q63HN8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF213Q63HN8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF213Q63HN8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF213Q63HN8 AP002414.2-202ENST00000590929 1450 ntBASIC13.09□□□□□ -0.31
RNF213Q63HN8 AK3-203ENST00000447596 705 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF213Q63HN8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF213Q63HN8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF213Q63HN8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF213Q63HN8 AC093827.2-201ENST00000512654 315 ntBASIC13.09□□□□□ -0.31
RNF213Q63HN8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.09□□□□□ -0.31
RNF213Q63HN8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC13.09□□□□□ -0.31
RNF213Q63HN8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF213Q63HN8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.09□□□□□ -0.31
RNF213Q63HN8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF213Q63HN8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms