Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM27BQ5VT28 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.97■□□□□ 0.95
FAM27BQ5VT28 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM27BQ5VT28 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM27BQ5VT28 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FAM27BQ5VT28 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
FAM27BQ5VT28 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.96■□□□□ 0.95
FAM27BQ5VT28 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.96■□□□□ 0.95
FAM27BQ5VT28 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
FAM27BQ5VT28 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM27BQ5VT28 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM27BQ5VT28 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.96■□□□□ 0.95
FAM27BQ5VT28 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.95■□□□□ 0.94
FAM27BQ5VT28 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM27BQ5VT28 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM27BQ5VT28 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM27BQ5VT28 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.95■□□□□ 0.94
FAM27BQ5VT28 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.95■□□□□ 0.94
FAM27BQ5VT28 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM27BQ5VT28 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM27BQ5VT28 AL592293.1-201ENST00000502889 1188 ntBASIC20.94■□□□□ 0.94
FAM27BQ5VT28 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM27BQ5VT28 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM27BQ5VT28 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.93■□□□□ 0.94
FAM27BQ5VT28 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FAM27BQ5VT28 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
FAM27BQ5VT28 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.93■□□□□ 0.94
FAM27BQ5VT28 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM27BQ5VT28 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
FAM27BQ5VT28 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FAM27BQ5VT28 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
FAM27BQ5VT28 U85056.1-201ENST00000616429 682 ntBASIC20.92■□□□□ 0.94
FAM27BQ5VT28 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM27BQ5VT28 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
FAM27BQ5VT28 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM27BQ5VT28 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FAM27BQ5VT28 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
FAM27BQ5VT28 ABHD17AP5-201ENST00000580133 923 ntBASIC20.91■□□□□ 0.94
FAM27BQ5VT28 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
FAM27BQ5VT28 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.91■□□□□ 0.94
FAM27BQ5VT28 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
FAM27BQ5VT28 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
FAM27BQ5VT28 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM27BQ5VT28 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FAM27BQ5VT28 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.89■□□□□ 0.93
FAM27BQ5VT28 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.89■□□□□ 0.93
FAM27BQ5VT28 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FAM27BQ5VT28 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
FAM27BQ5VT28 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
FAM27BQ5VT28 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FAM27BQ5VT28 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FAM27BQ5VT28 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.88■□□□□ 0.93
FAM27BQ5VT28 AC018755.3-202ENST00000596210 929 ntBASIC20.88■□□□□ 0.93
FAM27BQ5VT28 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FAM27BQ5VT28 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
FAM27BQ5VT28 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FAM27BQ5VT28 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FAM27BQ5VT28 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
FAM27BQ5VT28 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
FAM27BQ5VT28 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FAM27BQ5VT28 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FAM27BQ5VT28 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FAM27BQ5VT28 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.87■□□□□ 0.93
FAM27BQ5VT28 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FAM27BQ5VT28 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FAM27BQ5VT28 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FAM27BQ5VT28 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FAM27BQ5VT28 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
FAM27BQ5VT28 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FAM27BQ5VT28 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FAM27BQ5VT28 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FAM27BQ5VT28 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.86■□□□□ 0.93
FAM27BQ5VT28 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FAM27BQ5VT28 SPCS2P3-201ENST00000500401 656 ntBASIC20.86■□□□□ 0.93
FAM27BQ5VT28 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.86■□□□□ 0.93
FAM27BQ5VT28 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FAM27BQ5VT28 SLC6A10P-202ENST00000431994 2058 ntBASIC20.85■□□□□ 0.93
FAM27BQ5VT28 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM27BQ5VT28 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM27BQ5VT28 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM27BQ5VT28 AC022211.4-201ENST00000625094 2161 ntBASIC20.85■□□□□ 0.93
FAM27BQ5VT28 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.85■□□□□ 0.93
FAM27BQ5VT28 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FAM27BQ5VT28 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
FAM27BQ5VT28 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM27BQ5VT28 AC142381.3-201ENST00000568208 1670 ntBASIC20.85■□□□□ 0.93
FAM27BQ5VT28 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM27BQ5VT28 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM27BQ5VT28 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM27BQ5VT28 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.84■□□□□ 0.93
FAM27BQ5VT28 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM27BQ5VT28 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.84■□□□□ 0.93
FAM27BQ5VT28 KRT18P60-201ENST00000312876 1297 ntBASIC20.84■□□□□ 0.93
FAM27BQ5VT28 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FAM27BQ5VT28 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FAM27BQ5VT28 NTF6A-201ENST00000591175 560 ntBASIC20.84■□□□□ 0.93
FAM27BQ5VT28 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM27BQ5VT28 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.84■□□□□ 0.93
FAM27BQ5VT28 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM27BQ5VT28 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms