Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 snR82snR82 268 nt6.08□□□□□ -1.44
DDC1Q08949 YBR144CYBR144C 315 nt6.08□□□□□ -1.44
DDC1Q08949 DON1YDR273W 1098 nt6.07□□□□□ -1.44
DDC1Q08949 SUP19tS(UGA)E 82 nt6.07□□□□□ -1.44
DDC1Q08949 SUP17tS(UGA)I 82 nt6.07□□□□□ -1.44
DDC1Q08949 SUP16tS(UGA)P 82 nt6.07□□□□□ -1.44
DDC1Q08949 YIL077CYIL077C 963 nt6.07□□□□□ -1.44
DDC1Q08949 RPE1YJL121C 717 nt6.06□□□□□ -1.44
DDC1Q08949 SSP120YLR250W 705 nt6.06□□□□□ -1.44
DDC1Q08949 GLN1YPR035W 1113 nt6.06□□□□□ -1.44
DDC1Q08949 MCM3YEL032W 2916 nt6.05□□□□□ -1.44
DDC1Q08949 RPS9AYPL081W 594 nt6.05□□□□□ -1.44
DDC1Q08949 YEL020CYEL020C 1683 nt6.04□□□□□ -1.44
DDC1Q08949 YDR109CYDR109C 2148 nt6.04□□□□□ -1.44
DDC1Q08949 APE3YBR286W 1614 nt6.04□□□□□ -1.44
DDC1Q08949 PFK2YMR205C 2880 nt6.04□□□□□ -1.44
DDC1Q08949 PGK1YCR012W 1251 nt6.04□□□□□ -1.44
DDC1Q08949 RPN11YFR004W 921 nt6.04□□□□□ -1.44
DDC1Q08949 MTC2YKL098W 1074 nt6.04□□□□□ -1.44
DDC1Q08949 YML083CYML083C 1257 nt6.04□□□□□ -1.44
DDC1Q08949 SKI2YLR398C 3864 nt6.04□□□□□ -1.44
DDC1Q08949 CDC19YAL038W 1503 nt6.04□□□□□ -1.44
DDC1Q08949 GIT1YCR098C 1557 nt6.03□□□□□ -1.44
DDC1Q08949 ATF1YOR377W 1578 nt6.03□□□□□ -1.44
DDC1Q08949 YDL119CYDL119C 924 nt6.03□□□□□ -1.44
DDC1Q08949 ATP4YPL078C 735 nt6.03□□□□□ -1.44
DDC1Q08949 LAG2YOL025W 1983 nt6.03□□□□□ -1.44
DDC1Q08949 EFT2YDR385W 2529 nt6.03□□□□□ -1.44
DDC1Q08949 EFT1YOR133W 2529 nt6.03□□□□□ -1.44
DDC1Q08949 ICS3YJL077C 396 nt6.02□□□□□ -1.45
DDC1Q08949 YNR040WYNR040W 771 nt6.02□□□□□ -1.45
DDC1Q08949 IFA38YBR159W 1044 nt6.02□□□□□ -1.45
DDC1Q08949 YIL055CYIL055C 1884 nt6.02□□□□□ -1.45
DDC1Q08949 PCS60YBR222C 1632 nt6.01□□□□□ -1.45
DDC1Q08949 MDH3YDL078C 1032 nt6.01□□□□□ -1.45
DDC1Q08949 SUP2tY(GUA)D 75 nt6.01□□□□□ -1.45
DDC1Q08949 SUP11tY(GUA)F1 75 nt6.01□□□□□ -1.45
DDC1Q08949 SUP6tY(GUA)F2 75 nt6.01□□□□□ -1.45
DDC1Q08949 SUP7tY(GUA)J1 75 nt6.01□□□□□ -1.45
DDC1Q08949 SUP4tY(GUA)J2 75 nt6.01□□□□□ -1.45
DDC1Q08949 SUP5tY(GUA)M1 75 nt6.01□□□□□ -1.45
DDC1Q08949 SUP8tY(GUA)M2 75 nt6.01□□□□□ -1.45
DDC1Q08949 DJP1YIR004W 1299 nt6.01□□□□□ -1.45
DDC1Q08949 SUP3tY(GUA)O 75 nt6.01□□□□□ -1.45
DDC1Q08949 YOL163WYOL163W 510 nt6.01□□□□□ -1.45
DDC1Q08949 GLN3YER040W 2193 nt6.01□□□□□ -1.45
DDC1Q08949 YHL017WYHL017W 1599 nt6.01□□□□□ -1.45
DDC1Q08949 CBP4YGR174C 513 nt6□□□□□ -1.45
DDC1Q08949 RRP4YHR069C 1080 nt6□□□□□ -1.45
DDC1Q08949 MNN5YJL186W 1761 nt6□□□□□ -1.45
DDC1Q08949 YOL036WYOL036W 2286 nt6□□□□□ -1.45
DDC1Q08949 DUG1YFR044C 1446 nt5.99□□□□□ -1.45
DDC1Q08949 CNE1YAL058W 1509 nt5.99□□□□□ -1.45
DDC1Q08949 LDB19YOR322C 2457 nt5.99□□□□□ -1.45
DDC1Q08949 YCR047W-AYCR047W-A 207 nt5.99□□□□□ -1.45
DDC1Q08949 ARA2YMR041C 1008 nt5.99□□□□□ -1.45
DDC1Q08949 MRPL22YNL177C 930 nt5.99□□□□□ -1.45
DDC1Q08949 RAD3YER171W 2337 nt5.99□□□□□ -1.45
DDC1Q08949 VRP1YLR337C 2454 nt5.99□□□□□ -1.45
DDC1Q08949 GFA1YKL104C 2154 nt5.99□□□□□ -1.45
DDC1Q08949 ATG22YCL038C 1587 nt5.98□□□□□ -1.45
DDC1Q08949 ACS1YAL054C 2142 nt5.98□□□□□ -1.45
DDC1Q08949 YDL114WYDL114W 927 nt5.98□□□□□ -1.45
DDC1Q08949 GPI11YDR302W 660 nt5.98□□□□□ -1.45
DDC1Q08949 RPR2YIR015W 435 nt5.98□□□□□ -1.45
DDC1Q08949 EHD3YDR036C 1503 nt5.98□□□□□ -1.45
DDC1Q08949 CEF1YMR213W 1773 nt5.98□□□□□ -1.45
DDC1Q08949 GLE1YDL207W 1617 nt5.97□□□□□ -1.45
DDC1Q08949 YCL065WYCL065W 369 nt5.97□□□□□ -1.45
DDC1Q08949 HAP2YGL237C 798 nt5.97□□□□□ -1.45
DDC1Q08949 IDP3YNL009W 1263 nt5.97□□□□□ -1.45
DDC1Q08949 AVT4YNL101W 2142 nt5.97□□□□□ -1.45
DDC1Q08949 SUB2YDL084W 1341 nt5.97□□□□□ -1.45
DDC1Q08949 PRP24YMR268C 1335 nt5.97□□□□□ -1.45
DDC1Q08949 VHT1YGR065C 1782 nt5.96□□□□□ -1.46
DDC1Q08949 YEA6YEL006W 1008 nt5.96□□□□□ -1.46
DDC1Q08949 YGR022CYGR022C 330 nt5.96□□□□□ -1.46
DDC1Q08949 PAN6YIL145C 930 nt5.96□□□□□ -1.46
DDC1Q08949 MRP17YKL003C 396 nt5.96□□□□□ -1.46
DDC1Q08949 YJU3YKL094W 942 nt5.96□□□□□ -1.46
DDC1Q08949 YPR123CYPR123C 435 nt5.96□□□□□ -1.46
DDC1Q08949 AMD1YML035C 2433 nt5.96□□□□□ -1.46
DDC1Q08949 YRA1YDR381W 681 nt5.95□□□□□ -1.46
DDC1Q08949 RME1YGR044C 903 nt5.95□□□□□ -1.46
DDC1Q08949 MRS1YIR021W 1092 nt5.95□□□□□ -1.46
DDC1Q08949 YUR1YJL139C 1287 nt5.95□□□□□ -1.46
DDC1Q08949 EFM3YJR129C 1020 nt5.95□□□□□ -1.46
DDC1Q08949 LST8YNL006W 912 nt5.95□□□□□ -1.46
DDC1Q08949 NSE5YML023C 1671 nt5.94□□□□□ -1.46
DDC1Q08949 RHB1YCR027C 630 nt5.94□□□□□ -1.46
DDC1Q08949 LYS12YIL094C 1116 nt5.94□□□□□ -1.46
DDC1Q08949 APS3YJL024C 585 nt5.94□□□□□ -1.46
DDC1Q08949 YNR075C-AYNR075C-A 93 nt5.94□□□□□ -1.46
DDC1Q08949 YML082WYML082W 1950 nt5.94□□□□□ -1.46
DDC1Q08949 YPK2YMR104C 2034 nt5.94□□□□□ -1.46
DDC1Q08949 MSS1YMR023C 1581 nt5.93□□□□□ -1.46
DDC1Q08949 ORC5YNL261W 1440 nt5.93□□□□□ -1.46
DDC1Q08949 SEC20YDR498C 1152 nt5.93□□□□□ -1.46
DDC1Q08949 YKL031WYKL031W 414 nt5.93□□□□□ -1.46
DDC1Q08949 RPL10YLR075W 666 nt5.93□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 20.8 ms