Protein–RNA interactions for Protein: Q04214

TY1B-MR1, Transposon Ty1-MR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-MR1Q04214 tN(GUU)FtN(GUU)F 74 nt8.66□□□□□ -1.02
TY1B-MR1Q04214 tN(GUU)GtN(GUU)G 74 nt8.66□□□□□ -1.02
TY1B-MR1Q04214 tN(GUU)KtN(GUU)K 74 nt8.66□□□□□ -1.02
TY1B-MR1Q04214 tN(GUU)LtN(GUU)L 74 nt8.66□□□□□ -1.02
TY1B-MR1Q04214 tN(GUU)N1tN(GUU)N1 74 nt8.66□□□□□ -1.02
TY1B-MR1Q04214 tN(GUU)N2tN(GUU)N2 74 nt8.66□□□□□ -1.02
TY1B-MR1Q04214 tN(GUU)O1tN(GUU)O1 74 nt8.66□□□□□ -1.02
TY1B-MR1Q04214 tN(GUU)O2tN(GUU)O2 74 nt8.66□□□□□ -1.02
TY1B-MR1Q04214 tN(GUU)PtN(GUU)P 74 nt8.66□□□□□ -1.02
TY1B-MR1Q04214 YHR127WYHR127W 732 nt8.66□□□□□ -1.02
TY1B-MR1Q04214 COA1YIL157C 594 nt8.66□□□□□ -1.02
TY1B-MR1Q04214 PRP46YPL151C 1356 nt8.65□□□□□ -1.02
TY1B-MR1Q04214 YRA1YDR381W 681 nt8.65□□□□□ -1.02
TY1B-MR1Q04214 UTR4YEL038W 684 nt8.65□□□□□ -1.02
TY1B-MR1Q04214 BCY1YIL033C 1251 nt8.65□□□□□ -1.02
TY1B-MR1Q04214 YOR318CYOR318C 306 nt8.65□□□□□ -1.02
TY1B-MR1Q04214 YDR278CYDR278C 318 nt8.64□□□□□ -1.03
TY1B-MR1Q04214 RDN37-1RDN37-1 5354 nt8.64□□□□□ -1.03
TY1B-MR1Q04214 RDN37-2RDN37-2 5354 nt8.64□□□□□ -1.03
TY1B-MR1Q04214 PYC2YBR218C 3543 nt8.63□□□□□ -1.03
TY1B-MR1Q04214 SHE10YGL228W 1734 nt8.63□□□□□ -1.03
TY1B-MR1Q04214 CRP1YHR146W 1398 nt8.63□□□□□ -1.03
TY1B-MR1Q04214 SUP19tS(UGA)E 82 nt8.61□□□□□ -1.03
TY1B-MR1Q04214 SUP17tS(UGA)I 82 nt8.61□□□□□ -1.03
TY1B-MR1Q04214 SUP16tS(UGA)P 82 nt8.61□□□□□ -1.03
TY1B-MR1Q04214 COX5AYNL052W 462 nt8.61□□□□□ -1.03
TY1B-MR1Q04214 GLE1YDL207W 1617 nt8.61□□□□□ -1.03
TY1B-MR1Q04214 SES1YDR023W 1389 nt8.61□□□□□ -1.03
TY1B-MR1Q04214 YHC3YJL059W 1227 nt8.61□□□□□ -1.03
TY1B-MR1Q04214 COT1YOR316C 1320 nt8.59□□□□□ -1.03
TY1B-MR1Q04214 YEA6YEL006W 1008 nt8.59□□□□□ -1.03
TY1B-MR1Q04214 HSP12YFL014W 330 nt8.59□□□□□ -1.03
TY1B-MR1Q04214 NPA3YJR072C 1158 nt8.59□□□□□ -1.03
TY1B-MR1Q04214 FRS2YFL022C 1512 nt8.59□□□□□ -1.03
TY1B-MR1Q04214 YRF1-1YDR545W 5391 nt8.59□□□□□ -1.03
TY1B-MR1Q04214 YRF1-5YLR467W 5391 nt8.59□□□□□ -1.03
TY1B-MR1Q04214 YRF1-8YOR396W 5391 nt8.59□□□□□ -1.03
TY1B-MR1Q04214 YLR118CYLR118C 684 nt8.58□□□□□ -1.04
TY1B-MR1Q04214 YNL296WYNL296W 315 nt8.58□□□□□ -1.04
TY1B-MR1Q04214 COX26YDR119W-A 201 nt8.58□□□□□ -1.04
TY1B-MR1Q04214 COS9YKL219W 1224 nt8.58□□□□□ -1.04
TY1B-MR1Q04214 SMK1YPR054W 1167 nt8.58□□□□□ -1.04
TY1B-MR1Q04214 SSK22YCR073C 3996 nt8.58□□□□□ -1.04
TY1B-MR1Q04214 YML082WYML082W 1950 nt8.57□□□□□ -1.04
TY1B-MR1Q04214 TDH3YGR192C 999 nt8.57□□□□□ -1.04
TY1B-MR1Q04214 MIM2YLR099W-A 264 nt8.56□□□□□ -1.04
TY1B-MR1Q04214 KIN1YDR122W 3195 nt8.55□□□□□ -1.04
TY1B-MR1Q04214 YML083CYML083C 1257 nt8.55□□□□□ -1.04
TY1B-MR1Q04214 SRF1YDL133W 1314 nt8.54□□□□□ -1.04
TY1B-MR1Q04214 RPT3YDR394W 1287 nt8.54□□□□□ -1.04
TY1B-MR1Q04214 SER1YOR184W 1188 nt8.53□□□□□ -1.04
TY1B-MR1Q04214 YPL277CYPL277C 1464 nt8.53□□□□□ -1.04
TY1B-MR1Q04214 THI21YPL258C 1656 nt8.53□□□□□ -1.04
TY1B-MR1Q04214 YMR010WYMR010W 1218 nt8.53□□□□□ -1.04
TY1B-MR1Q04214 YHR131CYHR131C 2553 nt8.52□□□□□ -1.05
TY1B-MR1Q04214 MHR1YDR296W 681 nt8.52□□□□□ -1.05
TY1B-MR1Q04214 RER2YBR002C 861 nt8.52□□□□□ -1.05
TY1B-MR1Q04214 TFS1YLR178C 660 nt8.51□□□□□ -1.05
TY1B-MR1Q04214 MMP1YLL061W 1752 nt8.51□□□□□ -1.05
TY1B-MR1Q04214 EEB1YPL095C 1371 nt8.51□□□□□ -1.05
TY1B-MR1Q04214 HCR1YLR192C 798 nt8.5□□□□□ -1.05
TY1B-MR1Q04214 MRPL4YLR439W 960 nt8.5□□□□□ -1.05
TY1B-MR1Q04214 YOL097W-AYOL097W-A 186 nt8.5□□□□□ -1.05
TY1B-MR1Q04214 LAS17YOR181W 1902 nt8.5□□□□□ -1.05
TY1B-MR1Q04214 YGR068W-AYGR068W-A 96 nt8.49□□□□□ -1.05
TY1B-MR1Q04214 PHO8YDR481C 1701 nt8.49□□□□□ -1.05
TY1B-MR1Q04214 GID7YCL039W 2238 nt8.49□□□□□ -1.05
TY1B-MR1Q04214 GTB1YDR221W 2109 nt8.49□□□□□ -1.05
TY1B-MR1Q04214 SEC23YPR181C 2307 nt8.48□□□□□ -1.05
TY1B-MR1Q04214 DMA1YHR115C 1251 nt8.48□□□□□ -1.05
TY1B-MR1Q04214 YUR1YJL139C 1287 nt8.48□□□□□ -1.05
TY1B-MR1Q04214 CBC2YPL178W 627 nt8.48□□□□□ -1.05
TY1B-MR1Q04214 ARG81YML099C 2643 nt8.47□□□□□ -1.05
TY1B-MR1Q04214 CBF1YJR060W 1056 nt8.46□□□□□ -1.05
TY1B-MR1Q04214 TAL1YLR354C 1008 nt8.44□□□□□ -1.06
TY1B-MR1Q04214 PGA3YML125C 939 nt8.44□□□□□ -1.06
TY1B-MR1Q04214 PIN2YOR104W 849 nt8.44□□□□□ -1.06
TY1B-MR1Q04214 YPR204WYPR204W 3099 nt8.44□□□□□ -1.06
TY1B-MR1Q04214 LAS21YJL062W 2493 nt8.43□□□□□ -1.06
TY1B-MR1Q04214 BUD28YLR062C 378 nt8.43□□□□□ -1.06
TY1B-MR1Q04214 YME1YPR024W 2244 nt8.43□□□□□ -1.06
TY1B-MR1Q04214 LYS12YIL094C 1116 nt8.43□□□□□ -1.06
TY1B-MR1Q04214 DIA3YDL024C 1407 nt8.42□□□□□ -1.06
TY1B-MR1Q04214 YJU3YKL094W 942 nt8.42□□□□□ -1.06
TY1B-MR1Q04214 YRF1-3YGR296W 5580 nt8.42□□□□□ -1.06
TY1B-MR1Q04214 YRF1-6YNL339C 5580 nt8.42□□□□□ -1.06
TY1B-MR1Q04214 YRF1-7YPL283C 5580 nt8.42□□□□□ -1.06
TY1B-MR1Q04214 MOD5YOR274W 1287 nt8.41□□□□□ -1.06
TY1B-MR1Q04214 GUT1YHL032C 2130 nt8.4□□□□□ -1.06
TY1B-MR1Q04214 RPS15YOL040C 429 nt8.4□□□□□ -1.06
TY1B-MR1Q04214 GET3YDL100C 1065 nt8.4□□□□□ -1.07
TY1B-MR1Q04214 YHL017WYHL017W 1599 nt8.4□□□□□ -1.07
TY1B-MR1Q04214 YNL190WYNL190W 615 nt8.39□□□□□ -1.07
TY1B-MR1Q04214 YBR016WYBR016W 387 nt8.39□□□□□ -1.07
TY1B-MR1Q04214 DUS4YLR405W 1104 nt8.38□□□□□ -1.07
TY1B-MR1Q04214 RCL1YOL010W 1104 nt8.38□□□□□ -1.07
TY1B-MR1Q04214 ETR1YBR026C 1143 nt8.38□□□□□ -1.07
TY1B-MR1Q04214 ECM38YLR299W 1983 nt8.37□□□□□ -1.07
TY1B-MR1Q04214 RPN12YFR052W 825 nt8.37□□□□□ -1.07
TY1B-MR1Q04214 RPS2YGL123W 765 nt8.37□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 61.2 ms