Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.26■■□□□ 1.31
PDX1P52945 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.26■■□□□ 1.31
PDX1P52945 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDX1P52945 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PDX1P52945 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDX1P52945 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PDX1P52945 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PDX1P52945 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.25■■□□□ 1.31
PDX1P52945 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDX1P52945 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.24■■□□□ 1.31
PDX1P52945 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDX1P52945 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
PDX1P52945 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
PDX1P52945 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDX1P52945 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.24■■□□□ 1.31
PDX1P52945 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.24■■□□□ 1.31
PDX1P52945 Z92544.1-202ENST00000571933 1220 ntBASIC23.24■■□□□ 1.31
PDX1P52945 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDX1P52945 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDX1P52945 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.23■■□□□ 1.31
PDX1P52945 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.23■■□□□ 1.31
PDX1P52945 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.23■■□□□ 1.31
PDX1P52945 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.23■■□□□ 1.31
PDX1P52945 AC019069.1-201ENST00000610008 1333 ntBASIC23.23■■□□□ 1.31
PDX1P52945 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDX1P52945 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.22■■□□□ 1.31
PDX1P52945 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDX1P52945 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PDX1P52945 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.21■■□□□ 1.31
PDX1P52945 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDX1P52945 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDX1P52945 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.21■■□□□ 1.31
PDX1P52945 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PDX1P52945 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
PDX1P52945 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
PDX1P52945 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.2■■□□□ 1.3
PDX1P52945 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
PDX1P52945 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PDX1P52945 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDX1P52945 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDX1P52945 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
PDX1P52945 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDX1P52945 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDX1P52945 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
PDX1P52945 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDX1P52945 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDX1P52945 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDX1P52945 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDX1P52945 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.18■■□□□ 1.3
PDX1P52945 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDX1P52945 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDX1P52945 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.17■■□□□ 1.3
PDX1P52945 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.17■■□□□ 1.3
PDX1P52945 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.17■■□□□ 1.3
PDX1P52945 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.17■■□□□ 1.3
PDX1P52945 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PDX1P52945 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.17■■□□□ 1.3
PDX1P52945 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDX1P52945 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDX1P52945 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDX1P52945 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDX1P52945 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDX1P52945 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PDX1P52945 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
PDX1P52945 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
PDX1P52945 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDX1P52945 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDX1P52945 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDX1P52945 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.15■■□□□ 1.3
PDX1P52945 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDX1P52945 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.15■■□□□ 1.3
PDX1P52945 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDX1P52945 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDX1P52945 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PDX1P52945 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PDX1P52945 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
PDX1P52945 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PDX1P52945 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
PDX1P52945 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDX1P52945 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PDX1P52945 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PDX1P52945 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.14■■□□□ 1.29
PDX1P52945 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDX1P52945 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDX1P52945 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.13■■□□□ 1.29
PDX1P52945 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PDX1P52945 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDX1P52945 AC022616.5-201ENST00000518796 181 ntBASIC23.12■■□□□ 1.29
PDX1P52945 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PDX1P52945 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.12■■□□□ 1.29
PDX1P52945 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDX1P52945 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PDX1P52945 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.11■■□□□ 1.29
PDX1P52945 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.11■■□□□ 1.29
PDX1P52945 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.11■■□□□ 1.29
PDX1P52945 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.11■■□□□ 1.29
PDX1P52945 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
PDX1P52945 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDX1P52945 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDX1P52945 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms