Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX2P48378 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX2P48378 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFX2P48378 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX2P48378 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.74■□□□□ 0.91
RFX2P48378 AC108673.1-201ENST00000510422 1159 ntBASIC20.74■□□□□ 0.91
RFX2P48378 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.74■□□□□ 0.91
RFX2P48378 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RFX2P48378 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX2P48378 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX2P48378 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX2P48378 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX2P48378 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFX2P48378 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX2P48378 MIR6090-201ENST00000622481 60 ntBASIC20.73■□□□□ 0.91
RFX2P48378 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX2P48378 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX2P48378 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX2P48378 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX2P48378 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX2P48378 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RFX2P48378 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX2P48378 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX2P48378 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX2P48378 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX2P48378 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.72■□□□□ 0.91
RFX2P48378 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX2P48378 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
RFX2P48378 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX2P48378 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.71■□□□□ 0.91
RFX2P48378 AC005559.1-201ENST00000589661 871 ntBASIC20.71■□□□□ 0.91
RFX2P48378 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFX2P48378 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFX2P48378 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX2P48378 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX2P48378 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX2P48378 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.71■□□□□ 0.91
RFX2P48378 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFX2P48378 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX2P48378 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX2P48378 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.7■□□□□ 0.9
RFX2P48378 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX2P48378 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX2P48378 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.69■□□□□ 0.9
RFX2P48378 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX2P48378 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RFX2P48378 AL117328.2-201ENST00000624617 1940 ntBASIC20.69■□□□□ 0.9
RFX2P48378 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
RFX2P48378 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFX2P48378 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
RFX2P48378 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.69■□□□□ 0.9
RFX2P48378 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX2P48378 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RFX2P48378 AL024507.2-201ENST00000606070 2574 ntBASIC20.69■□□□□ 0.9
RFX2P48378 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX2P48378 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFX2P48378 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX2P48378 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
RFX2P48378 AP003733.4-201ENST00000623785 1697 ntBASIC20.68■□□□□ 0.9
RFX2P48378 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX2P48378 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RFX2P48378 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
RFX2P48378 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX2P48378 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.68■□□□□ 0.9
RFX2P48378 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RFX2P48378 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.67■□□□□ 0.9
RFX2P48378 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX2P48378 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX2P48378 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFX2P48378 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX2P48378 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX2P48378 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFX2P48378 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFX2P48378 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFX2P48378 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
RFX2P48378 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RFX2P48378 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RFX2P48378 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX2P48378 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFX2P48378 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFX2P48378 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFX2P48378 LINC00565-201ENST00000562710 2331 ntBASIC20.64■□□□□ 0.89
RFX2P48378 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX2P48378 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFX2P48378 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX2P48378 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFX2P48378 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX2P48378 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX2P48378 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX2P48378 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFX2P48378 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RFX2P48378 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX2P48378 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX2P48378 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX2P48378 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFX2P48378 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.62■□□□□ 0.89
RFX2P48378 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX2P48378 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFX2P48378 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.62■□□□□ 0.89
RFX2P48378 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms