Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 tN(GUU)N1tN(GUU)N1 74 nt8.81□□□□□ -1
TY1B-JR1P47098 tN(GUU)N2tN(GUU)N2 74 nt8.81□□□□□ -1
TY1B-JR1P47098 tN(GUU)O1tN(GUU)O1 74 nt8.81□□□□□ -1
TY1B-JR1P47098 tN(GUU)O2tN(GUU)O2 74 nt8.81□□□□□ -1
TY1B-JR1P47098 tN(GUU)PtN(GUU)P 74 nt8.81□□□□□ -1
TY1B-JR1P47098 GLN1YPR035W 1113 nt8.81□□□□□ -1
TY1B-JR1P47098 TEP1YNL128W 1305 nt8.81□□□□□ -1
TY1B-JR1P47098 PRP46YPL151C 1356 nt8.81□□□□□ -1
TY1B-JR1P47098 POB3YML069W 1659 nt8.81□□□□□ -1
TY1B-JR1P47098 YER010CYER010C 705 nt8.81□□□□□ -1
TY1B-JR1P47098 LPD1YFL018C 1500 nt8.8□□□□□ -1
TY1B-JR1P47098 PET112YBL080C 1626 nt8.8□□□□□ -1
TY1B-JR1P47098 YRA1YDR381W 681 nt8.8□□□□□ -1
TY1B-JR1P47098 YRF1-2YER190W 5046 nt8.8□□□□□ -1
TY1B-JR1P47098 COA1YIL157C 594 nt8.79□□□□□ -1
TY1B-JR1P47098 COT1YOR316C 1320 nt8.79□□□□□ -1
TY1B-JR1P47098 SHE10YGL228W 1734 nt8.79□□□□□ -1
TY1B-JR1P47098 BCY1YIL033C 1251 nt8.78□□□□□ -1
TY1B-JR1P47098 GTB1YDR221W 2109 nt8.77□□□□□ -1.01
TY1B-JR1P47098 YDR278CYDR278C 318 nt8.77□□□□□ -1.01
TY1B-JR1P47098 HHY1YEL059W 309 nt8.77□□□□□ -1.01
TY1B-JR1P47098 YNL296WYNL296W 315 nt8.77□□□□□ -1.01
TY1B-JR1P47098 GLE1YDL207W 1617 nt8.76□□□□□ -1.01
TY1B-JR1P47098 CRP1YHR146W 1398 nt8.76□□□□□ -1.01
TY1B-JR1P47098 SUP19tS(UGA)E 82 nt8.76□□□□□ -1.01
TY1B-JR1P47098 SUP17tS(UGA)I 82 nt8.76□□□□□ -1.01
TY1B-JR1P47098 SUP16tS(UGA)P 82 nt8.76□□□□□ -1.01
TY1B-JR1P47098 MIM2YLR099W-A 264 nt8.76□□□□□ -1.01
TY1B-JR1P47098 YLR118CYLR118C 684 nt8.76□□□□□ -1.01
TY1B-JR1P47098 PYC2YBR218C 3543 nt8.75□□□□□ -1.01
TY1B-JR1P47098 HCR1YLR192C 798 nt8.75□□□□□ -1.01
TY1B-JR1P47098 GID7YCL039W 2238 nt8.74□□□□□ -1.01
TY1B-JR1P47098 YEA6YEL006W 1008 nt8.74□□□□□ -1.01
TY1B-JR1P47098 HSP12YFL014W 330 nt8.74□□□□□ -1.01
TY1B-JR1P47098 RDN37-1RDN37-1 5354 nt8.74□□□□□ -1.01
TY1B-JR1P47098 RDN37-2RDN37-2 5354 nt8.74□□□□□ -1.01
TY1B-JR1P47098 TDH3YGR192C 999 nt8.73□□□□□ -1.01
TY1B-JR1P47098 NPA3YJR072C 1158 nt8.73□□□□□ -1.01
TY1B-JR1P47098 COS9YKL219W 1224 nt8.73□□□□□ -1.01
TY1B-JR1P47098 COX5AYNL052W 462 nt8.73□□□□□ -1.01
TY1B-JR1P47098 SES1YDR023W 1389 nt8.73□□□□□ -1.01
TY1B-JR1P47098 COX26YDR119W-A 201 nt8.73□□□□□ -1.01
TY1B-JR1P47098 YMR010WYMR010W 1218 nt8.73□□□□□ -1.01
TY1B-JR1P47098 SMK1YPR054W 1167 nt8.73□□□□□ -1.01
TY1B-JR1P47098 FRS2YFL022C 1512 nt8.73□□□□□ -1.01
TY1B-JR1P47098 SSK22YCR073C 3996 nt8.72□□□□□ -1.01
TY1B-JR1P47098 YPL277CYPL277C 1464 nt8.72□□□□□ -1.01
TY1B-JR1P47098 YML082WYML082W 1950 nt8.71□□□□□ -1.01
TY1B-JR1P47098 THI21YPL258C 1656 nt8.7□□□□□ -1.02
TY1B-JR1P47098 EEB1YPL095C 1371 nt8.7□□□□□ -1.02
TY1B-JR1P47098 SER1YOR184W 1188 nt8.7□□□□□ -1.02
TY1B-JR1P47098 MHR1YDR296W 681 nt8.69□□□□□ -1.02
TY1B-JR1P47098 MRPL4YLR439W 960 nt8.69□□□□□ -1.02
TY1B-JR1P47098 RER2YBR002C 861 nt8.69□□□□□ -1.02
TY1B-JR1P47098 YHR131CYHR131C 2553 nt8.68□□□□□ -1.02
TY1B-JR1P47098 RPT3YDR394W 1287 nt8.68□□□□□ -1.02
TY1B-JR1P47098 TFS1YLR178C 660 nt8.68□□□□□ -1.02
TY1B-JR1P47098 YML083CYML083C 1257 nt8.68□□□□□ -1.02
TY1B-JR1P47098 MMP1YLL061W 1752 nt8.67□□□□□ -1.02
TY1B-JR1P47098 YRF1-1YDR545W 5391 nt8.67□□□□□ -1.02
TY1B-JR1P47098 YRF1-5YLR467W 5391 nt8.67□□□□□ -1.02
TY1B-JR1P47098 YRF1-8YOR396W 5391 nt8.67□□□□□ -1.02
TY1B-JR1P47098 YOL097W-AYOL097W-A 186 nt8.66□□□□□ -1.02
TY1B-JR1P47098 KIN1YDR122W 3195 nt8.66□□□□□ -1.02
TY1B-JR1P47098 LAS17YOR181W 1902 nt8.66□□□□□ -1.02
TY1B-JR1P47098 PHO8YDR481C 1701 nt8.65□□□□□ -1.02
TY1B-JR1P47098 SRF1YDL133W 1314 nt8.65□□□□□ -1.02
TY1B-JR1P47098 CBC2YPL178W 627 nt8.65□□□□□ -1.02
TY1B-JR1P47098 CBF1YJR060W 1056 nt8.63□□□□□ -1.03
TY1B-JR1P47098 YUR1YJL139C 1287 nt8.63□□□□□ -1.03
TY1B-JR1P47098 LAS21YJL062W 2493 nt8.63□□□□□ -1.03
TY1B-JR1P47098 DMA1YHR115C 1251 nt8.61□□□□□ -1.03
TY1B-JR1P47098 YJU3YKL094W 942 nt8.61□□□□□ -1.03
TY1B-JR1P47098 BUD28YLR062C 378 nt8.61□□□□□ -1.03
TY1B-JR1P47098 PIN2YOR104W 849 nt8.6□□□□□ -1.03
TY1B-JR1P47098 YGR068W-AYGR068W-A 96 nt8.59□□□□□ -1.03
TY1B-JR1P47098 TAL1YLR354C 1008 nt8.58□□□□□ -1.04
TY1B-JR1P47098 PGA3YML125C 939 nt8.58□□□□□ -1.04
TY1B-JR1P47098 RCL1YOL010W 1104 nt8.58□□□□□ -1.04
TY1B-JR1P47098 YBR016WYBR016W 387 nt8.58□□□□□ -1.04
TY1B-JR1P47098 ARG81YML099C 2643 nt8.58□□□□□ -1.04
TY1B-JR1P47098 YME1YPR024W 2244 nt8.58□□□□□ -1.04
TY1B-JR1P47098 SEC23YPR181C 2307 nt8.58□□□□□ -1.04
TY1B-JR1P47098 GET3YDL100C 1065 nt8.57□□□□□ -1.04
TY1B-JR1P47098 RPS15YOL040C 429 nt8.57□□□□□ -1.04
TY1B-JR1P47098 GUT1YHL032C 2130 nt8.56□□□□□ -1.04
TY1B-JR1P47098 LYS12YIL094C 1116 nt8.56□□□□□ -1.04
TY1B-JR1P47098 DIA3YDL024C 1407 nt8.56□□□□□ -1.04
TY1B-JR1P47098 FAA4YMR246W 2085 nt8.55□□□□□ -1.04
TY1B-JR1P47098 ETR1YBR026C 1143 nt8.55□□□□□ -1.04
TY1B-JR1P47098 YPR204WYPR204W 3099 nt8.54□□□□□ -1.04
TY1B-JR1P47098 RPN12YFR052W 825 nt8.54□□□□□ -1.04
TY1B-JR1P47098 MOD5YOR274W 1287 nt8.53□□□□□ -1.04
TY1B-JR1P47098 MET8YBR213W 825 nt8.53□□□□□ -1.04
TY1B-JR1P47098 DPH2YKL191W 1605 nt8.53□□□□□ -1.04
TY1B-JR1P47098 GCS1YDL226C 1059 nt8.52□□□□□ -1.05
TY1B-JR1P47098 YHL017WYHL017W 1599 nt8.52□□□□□ -1.05
TY1B-JR1P47098 ARO2YGL148W 1131 nt8.51□□□□□ -1.05
TY1B-JR1P47098 JAC1YGL018C 555 nt8.5□□□□□ -1.05
TY1B-JR1P47098 FHN1YGR131W 525 nt8.5□□□□□ -1.05
Retrieved 100 of 7,029 protein–RNA pairs in 20 ms