Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 CDC19YAL038W 1503 nt8.32□□□□□ -1.08
SSM4P40318 STB5YHR178W 2232 nt8.32□□□□□ -1.08
SSM4P40318 MDH3YDL078C 1032 nt8.31□□□□□ -1.08
SSM4P40318 ERP5YHR110W 639 nt8.3□□□□□ -1.08
SSM4P40318 DCN1YLR128W 810 nt8.3□□□□□ -1.08
SSM4P40318 YPR123CYPR123C 435 nt8.3□□□□□ -1.08
SSM4P40318 HAP2YGL237C 798 nt8.29□□□□□ -1.08
SSM4P40318 YKL031WYKL031W 414 nt8.29□□□□□ -1.08
SSM4P40318 QCR6YFR033C 444 nt8.29□□□□□ -1.08
SSM4P40318 LYS12YIL094C 1116 nt8.29□□□□□ -1.08
SSM4P40318 CCP1YKR066C 1086 nt8.29□□□□□ -1.08
SSM4P40318 MRPL22YNL177C 930 nt8.29□□□□□ -1.08
SSM4P40318 SHM1YBR263W 1473 nt8.28□□□□□ -1.08
SSM4P40318 GLE1YDL207W 1617 nt8.28□□□□□ -1.08
SSM4P40318 PRP46YPL151C 1356 nt8.28□□□□□ -1.08
SSM4P40318 ADY2YCR010C 852 nt8.28□□□□□ -1.08
SSM4P40318 YER148W-AYER148W-A 579 nt8.28□□□□□ -1.08
SSM4P40318 RPS2YGL123W 765 nt8.28□□□□□ -1.08
SSM4P40318 YPK2YMR104C 2034 nt8.27□□□□□ -1.09
SSM4P40318 FRA1YLL029W 2250 nt8.27□□□□□ -1.09
SSM4P40318 YDL119CYDL119C 924 nt8.27□□□□□ -1.09
SSM4P40318 YGR022CYGR022C 330 nt8.27□□□□□ -1.09
SSM4P40318 RPR2YIR015W 435 nt8.27□□□□□ -1.09
SSM4P40318 STM1YLR150W 822 nt8.27□□□□□ -1.09
SSM4P40318 HIS7YBR248C 1659 nt8.26□□□□□ -1.09
SSM4P40318 YML6YML025C 861 nt8.25□□□□□ -1.09
SSM4P40318 ARR3YPR201W 1215 nt8.25□□□□□ -1.09
SSM4P40318 YBR124WYBR124W 360 nt8.25□□□□□ -1.09
SSM4P40318 MRC1YCL061C 3291 nt8.24□□□□□ -1.09
SSM4P40318 HSP78YDR258C 2436 nt8.24□□□□□ -1.09
SSM4P40318 YRA1YDR381W 681 nt8.24□□□□□ -1.09
SSM4P40318 YER010CYER010C 705 nt8.24□□□□□ -1.09
SSM4P40318 MTC2YKL098W 1074 nt8.24□□□□□ -1.09
SSM4P40318 YBR230W-AYBR230W-A 201 nt8.24□□□□□ -1.09
SSM4P40318 ECM30YLR436C 3825 nt8.23□□□□□ -1.09
SSM4P40318 AVT4YNL101W 2142 nt8.23□□□□□ -1.09
SSM4P40318 YEA6YEL006W 1008 nt8.23□□□□□ -1.09
SSM4P40318 PAN6YIL145C 930 nt8.23□□□□□ -1.09
SSM4P40318 YPL041CYPL041C 624 nt8.23□□□□□ -1.09
SSM4P40318 YCL065WYCL065W 369 nt8.22□□□□□ -1.09
SSM4P40318 COX9YDL067C 180 nt8.22□□□□□ -1.09
SSM4P40318 EFM4YIL064W 774 nt8.22□□□□□ -1.09
SSM4P40318 YER186CYER186C 921 nt8.21□□□□□ -1.1
SSM4P40318 RBD2YPL246C 789 nt8.21□□□□□ -1.1
SSM4P40318 VPS4YPR173C 1314 nt8.2□□□□□ -1.1
SSM4P40318 PYC1YGL062W 3537 nt8.2□□□□□ -1.1
SSM4P40318 ARG1YOL058W 1263 nt8.2□□□□□ -1.1
SSM4P40318 CBK1YNL161W 2271 nt8.2□□□□□ -1.1
SSM4P40318 IME2YJL106W 1938 nt8.19□□□□□ -1.1
SSM4P40318 YDR154CYDR154C 351 nt8.19□□□□□ -1.1
SSM4P40318 MRS1YIR021W 1092 nt8.19□□□□□ -1.1
SSM4P40318 YEH1YLL012W 1722 nt8.19□□□□□ -1.1
SSM4P40318 QNS1YHR074W 2145 nt8.18□□□□□ -1.1
SSM4P40318 KSS1YGR040W 1107 nt8.18□□□□□ -1.1
SSM4P40318 RPL10YLR075W 666 nt8.18□□□□□ -1.1
SSM4P40318 VNX1YNL321W 2727 nt8.18□□□□□ -1.1
SSM4P40318 RHB1YCR027C 630 nt8.17□□□□□ -1.1
SSM4P40318 MGM101YJR144W 810 nt8.17□□□□□ -1.1
SSM4P40318 YLR194CYLR194C 765 nt8.17□□□□□ -1.1
SSM4P40318 YDR514CYDR514C 1452 nt8.17□□□□□ -1.1
SSM4P40318 YME1YPR024W 2244 nt8.16□□□□□ -1.1
SSM4P40318 PPM1YDR435C 987 nt8.16□□□□□ -1.1
SSM4P40318 SCO2YBR024W 906 nt8.16□□□□□ -1.1
SSM4P40318 CCR4YAL021C 2514 nt8.16□□□□□ -1.1
SSM4P40318 YDL034WYDL034W 345 nt8.15□□□□□ -1.1
SSM4P40318 tN(GUU)CtN(GUU)C 74 nt8.15□□□□□ -1.1
SSM4P40318 tN(GUU)FtN(GUU)F 74 nt8.15□□□□□ -1.1
SSM4P40318 tN(GUU)GtN(GUU)G 74 nt8.15□□□□□ -1.1
SSM4P40318 tN(GUU)KtN(GUU)K 74 nt8.15□□□□□ -1.1
SSM4P40318 tN(GUU)LtN(GUU)L 74 nt8.15□□□□□ -1.1
SSM4P40318 tN(GUU)N1tN(GUU)N1 74 nt8.15□□□□□ -1.1
SSM4P40318 tN(GUU)N2tN(GUU)N2 74 nt8.15□□□□□ -1.1
SSM4P40318 tN(GUU)O1tN(GUU)O1 74 nt8.15□□□□□ -1.1
SSM4P40318 tN(GUU)O2tN(GUU)O2 74 nt8.15□□□□□ -1.1
SSM4P40318 tN(GUU)PtN(GUU)P 74 nt8.15□□□□□ -1.1
SSM4P40318 KEL1YHR158C 3495 nt8.13□□□□□ -1.11
SSM4P40318 RSC30YHR056C 2652 nt8.13□□□□□ -1.11
SSM4P40318 BIM1YER016W 1035 nt8.13□□□□□ -1.11
SSM4P40318 PAT1YCR077C 2391 nt8.13□□□□□ -1.11
SSM4P40318 GFD1YMR255W 567 nt8.12□□□□□ -1.11
SSM4P40318 HSX1tR(CCU)J 72 nt8.11□□□□□ -1.11
SSM4P40318 RAP1YNL216W 2484 nt8.1□□□□□ -1.11
SSM4P40318 DPH5YLR172C 903 nt8.1□□□□□ -1.11
SSM4P40318 MRPL36YBR122C 534 nt8.1□□□□□ -1.11
SSM4P40318 VPS5YOR069W 2028 nt8.09□□□□□ -1.11
SSM4P40318 SHE10YGL228W 1734 nt8.09□□□□□ -1.11
SSM4P40318 GUA1YMR217W 1578 nt8.09□□□□□ -1.11
SSM4P40318 CBP4YGR174C 513 nt8.07□□□□□ -1.12
SSM4P40318 COS9YKL219W 1224 nt8.07□□□□□ -1.12
SSM4P40318 HIR1YBL008W 2523 nt8.07□□□□□ -1.12
SSM4P40318 SMF2YHR050W 1650 nt8.06□□□□□ -1.12
SSM4P40318 MRPL13YKR006C 795 nt8.06□□□□□ -1.12
SSM4P40318 HCR1YLR192C 798 nt8.06□□□□□ -1.12
SSM4P40318 MLC2YPR188C 492 nt8.06□□□□□ -1.12
SSM4P40318 GYP1YOR070C 1914 nt8.06□□□□□ -1.12
SSM4P40318 snR82snR82 268 nt8.05□□□□□ -1.12
SSM4P40318 IPI1YHR085W 1005 nt8.05□□□□□ -1.12
SSM4P40318 ACO1YLR304C 2337 nt8.05□□□□□ -1.12
SSM4P40318 QDR3YBR043C 2070 nt8.05□□□□□ -1.12
SSM4P40318 BUL1YMR275C 2931 nt8.05□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms