Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ERCC1P07992 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21■□□□□ 0.95
ERCC1P07992 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ERCC1P07992 RP9P-202ENST00000450133 1212 ntBASIC20.99■□□□□ 0.95
ERCC1P07992 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.99■□□□□ 0.95
ERCC1P07992 AC133552.2-201ENST00000619106 1032 ntBASIC20.99■□□□□ 0.95
ERCC1P07992 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ERCC1P07992 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ERCC1P07992 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.99■□□□□ 0.95
ERCC1P07992 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC1P07992 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.98■□□□□ 0.95
ERCC1P07992 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC1P07992 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC1P07992 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.98■□□□□ 0.95
ERCC1P07992 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC1P07992 AC025884.2-201ENST00000553429 711 ntBASIC20.98■□□□□ 0.95
ERCC1P07992 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.98■□□□□ 0.95
ERCC1P07992 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ERCC1P07992 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.98■□□□□ 0.95
ERCC1P07992 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
ERCC1P07992 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ERCC1P07992 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ERCC1P07992 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.97■□□□□ 0.95
ERCC1P07992 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
ERCC1P07992 ERN1-208ENST00000606895 2068 ntBASIC20.97■□□□□ 0.95
ERCC1P07992 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC1P07992 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ERCC1P07992 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC1P07992 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ERCC1P07992 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.96■□□□□ 0.95
ERCC1P07992 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC1P07992 TSPY13P-201ENST00000338964 914 ntBASIC20.96■□□□□ 0.95
ERCC1P07992 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
ERCC1P07992 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC1P07992 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC1P07992 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.96■□□□□ 0.95
ERCC1P07992 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ERCC1P07992 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.95■□□□□ 0.94
ERCC1P07992 KRT18P60-201ENST00000312876 1297 ntBASIC20.95■□□□□ 0.94
ERCC1P07992 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC1P07992 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.95■□□□□ 0.94
ERCC1P07992 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ERCC1P07992 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
ERCC1P07992 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ERCC1P07992 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ERCC1P07992 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ERCC1P07992 AL033527.3-201ENST00000566366 1196 ntBASIC20.94■□□□□ 0.94
ERCC1P07992 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ERCC1P07992 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ERCC1P07992 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.93■□□□□ 0.94
ERCC1P07992 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.93■□□□□ 0.94
ERCC1P07992 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC1P07992 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC1P07992 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC1P07992 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ERCC1P07992 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.93■□□□□ 0.94
ERCC1P07992 AC142381.3-201ENST00000568208 1670 ntBASIC20.93■□□□□ 0.94
ERCC1P07992 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC1P07992 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC1P07992 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC1P07992 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.92■□□□□ 0.94
ERCC1P07992 AC093536.1-201ENST00000569153 554 ntBASIC20.92■□□□□ 0.94
ERCC1P07992 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC1P07992 AC009831.1-201ENST00000580420 1582 ntBASIC20.92■□□□□ 0.94
ERCC1P07992 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC1P07992 AC093323.1-202ENST00000635031 2045 ntBASIC20.92■□□□□ 0.94
ERCC1P07992 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ERCC1P07992 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC1P07992 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC1P07992 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC1P07992 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.91■□□□□ 0.94
ERCC1P07992 ATP5G2P3-201ENST00000429083 425 ntBASIC20.91■□□□□ 0.94
ERCC1P07992 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC1P07992 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ERCC1P07992 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC1P07992 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC1P07992 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC1P07992 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC1P07992 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC1P07992 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ERCC1P07992 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC1P07992 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC1P07992 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.89■□□□□ 0.94
ERCC1P07992 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ERCC1P07992 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ERCC1P07992 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC1P07992 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
ERCC1P07992 AC026202.3-201ENST00000600805 1127 ntBASIC20.89■□□□□ 0.93
ERCC1P07992 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC1P07992 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC1P07992 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ERCC1P07992 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC1P07992 AC004987.1-201ENST00000428627 508 ntBASIC20.88■□□□□ 0.93
ERCC1P07992 AL592293.1-201ENST00000502889 1188 ntBASIC20.88■□□□□ 0.93
ERCC1P07992 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.88■□□□□ 0.93
ERCC1P07992 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.88■□□□□ 0.93
ERCC1P07992 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC1P07992 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC1P07992 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC1P07992 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms