Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.09■□□□□ 0.81
CD74P04233 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD74P04233 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.09■□□□□ 0.81
CD74P04233 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD74P04233 MIR3665-201ENST00000578708 105 ntBASIC20.09■□□□□ 0.81
CD74P04233 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD74P04233 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD74P04233 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD74P04233 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD74P04233 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD74P04233 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD74P04233 DUSP8P5-201ENST00000422884 1815 ntBASIC20.09■□□□□ 0.81
CD74P04233 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD74P04233 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CD74P04233 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CD74P04233 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CD74P04233 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.08■□□□□ 0.8
CD74P04233 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.07■□□□□ 0.8
CD74P04233 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD74P04233 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD74P04233 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD74P04233 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD74P04233 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD74P04233 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD74P04233 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD74P04233 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CD74P04233 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD74P04233 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD74P04233 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD74P04233 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.05■□□□□ 0.8
CD74P04233 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CD74P04233 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD74P04233 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CD74P04233 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CD74P04233 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CD74P04233 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD74P04233 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD74P04233 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CD74P04233 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CD74P04233 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.04■□□□□ 0.8
CD74P04233 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD74P04233 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD74P04233 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD74P04233 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD74P04233 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD74P04233 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CD74P04233 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.03■□□□□ 0.8
CD74P04233 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD74P04233 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.03■□□□□ 0.8
CD74P04233 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD74P04233 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.03■□□□□ 0.8
CD74P04233 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CD74P04233 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CD74P04233 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD74P04233 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.02■□□□□ 0.8
CD74P04233 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CD74P04233 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CD74P04233 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CD74P04233 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CD74P04233 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.02■□□□□ 0.79
CD74P04233 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CD74P04233 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD74P04233 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD74P04233 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.01■□□□□ 0.79
CD74P04233 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD74P04233 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD74P04233 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20■□□□□ 0.79
CD74P04233 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD74P04233 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20■□□□□ 0.79
CD74P04233 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD74P04233 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD74P04233 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20■□□□□ 0.79
CD74P04233 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20■□□□□ 0.79
CD74P04233 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20■□□□□ 0.79
CD74P04233 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20■□□□□ 0.79
CD74P04233 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD74P04233 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CD74P04233 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.99■□□□□ 0.79
CD74P04233 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.99■□□□□ 0.79
CD74P04233 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD74P04233 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD74P04233 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CD74P04233 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD74P04233 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.98■□□□□ 0.79
CD74P04233 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.98■□□□□ 0.79
CD74P04233 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CD74P04233 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CD74P04233 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD74P04233 AL359504.2-201ENST00000605506 1601 ntBASIC19.98■□□□□ 0.79
CD74P04233 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CD74P04233 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CD74P04233 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD74P04233 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CD74P04233 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.97■□□□□ 0.79
CD74P04233 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD74P04233 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD74P04233 AC004812.2-201ENST00000611079 2094 ntBASIC19.96■□□□□ 0.79
CD74P04233 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD74P04233 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CD74P04233 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms