Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.38■■□□□ 1.81
TIMP1P01033 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
TIMP1P01033 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.38■■□□□ 1.81
TIMP1P01033 MTDHP2-201ENST00000601468 714 ntBASIC26.38■■□□□ 1.81
TIMP1P01033 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
TIMP1P01033 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
TIMP1P01033 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TIMP1P01033 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TIMP1P01033 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TIMP1P01033 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.37■■□□□ 1.81
TIMP1P01033 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
TIMP1P01033 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TIMP1P01033 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.36■■□□□ 1.81
TIMP1P01033 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
TIMP1P01033 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
TIMP1P01033 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.36■■□□□ 1.81
TIMP1P01033 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.36■■□□□ 1.81
TIMP1P01033 AL449106.1-201ENST00000608517 1980 ntBASIC26.36■■□□□ 1.81
TIMP1P01033 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.35■■□□□ 1.81
TIMP1P01033 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TIMP1P01033 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.35■■□□□ 1.81
TIMP1P01033 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
TIMP1P01033 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TIMP1P01033 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.34■■□□□ 1.81
TIMP1P01033 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TIMP1P01033 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.34■■□□□ 1.81
TIMP1P01033 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.34■■□□□ 1.81
TIMP1P01033 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.34■■□□□ 1.81
TIMP1P01033 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
TIMP1P01033 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.33■■□□□ 1.81
TIMP1P01033 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
TIMP1P01033 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TIMP1P01033 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TIMP1P01033 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TIMP1P01033 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
TIMP1P01033 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.32■■□□□ 1.8
TIMP1P01033 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TIMP1P01033 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.31■■□□□ 1.8
TIMP1P01033 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.31■■□□□ 1.8
TIMP1P01033 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
TIMP1P01033 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TIMP1P01033 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TIMP1P01033 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
TIMP1P01033 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TIMP1P01033 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.3■■□□□ 1.8
TIMP1P01033 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
TIMP1P01033 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TIMP1P01033 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.29■■□□□ 1.8
TIMP1P01033 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.29■■□□□ 1.8
TIMP1P01033 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.29■■□□□ 1.8
TIMP1P01033 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TIMP1P01033 AL512631.2-201ENST00000604634 923 ntBASIC26.29■■□□□ 1.8
TIMP1P01033 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TIMP1P01033 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.28■■□□□ 1.8
TIMP1P01033 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.28■■□□□ 1.8
TIMP1P01033 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TIMP1P01033 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.28■■□□□ 1.8
TIMP1P01033 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TIMP1P01033 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TIMP1P01033 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.27■■□□□ 1.8
TIMP1P01033 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.27■■□□□ 1.8
TIMP1P01033 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.27■■□□□ 1.8
TIMP1P01033 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.27■■□□□ 1.8
TIMP1P01033 AC092666.2-201ENST00000613287 246 ntBASIC26.27■■□□□ 1.8
TIMP1P01033 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.27■■□□□ 1.8
TIMP1P01033 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.27■■□□□ 1.8
TIMP1P01033 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.27■■□□□ 1.8
TIMP1P01033 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.26■■□□□ 1.79
TIMP1P01033 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TIMP1P01033 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TIMP1P01033 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TIMP1P01033 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.25■■□□□ 1.79
TIMP1P01033 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
TIMP1P01033 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TIMP1P01033 ZNRF2P3-201ENST00000424200 374 ntBASIC26.24■■□□□ 1.79
TIMP1P01033 RARRES2P6-201ENST00000567333 442 ntBASIC26.24■■□□□ 1.79
TIMP1P01033 AC011551.1-201ENST00000614101 683 ntBASIC26.24■■□□□ 1.79
TIMP1P01033 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.24■■□□□ 1.79
TIMP1P01033 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.24■■□□□ 1.79
TIMP1P01033 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TIMP1P01033 BX255925.1-201ENST00000566954 1854 ntBASIC26.23■■□□□ 1.79
TIMP1P01033 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
TIMP1P01033 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TIMP1P01033 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.23■■□□□ 1.79
TIMP1P01033 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.22■■□□□ 1.79
TIMP1P01033 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TIMP1P01033 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.22■■□□□ 1.79
TIMP1P01033 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.22■■□□□ 1.79
TIMP1P01033 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TIMP1P01033 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TIMP1P01033 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TIMP1P01033 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TIMP1P01033 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TIMP1P01033 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TIMP1P01033 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.21■■□□□ 1.79
TIMP1P01033 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.21■■□□□ 1.79
TIMP1P01033 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TIMP1P01033 AC106739.1-201ENST00000617035 715 ntBASIC26.21■■□□□ 1.79
TIMP1P01033 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.21■■□□□ 1.79
TIMP1P01033 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms