Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TNFSF12O43508 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.73■□□□□ 0.75
TNFSF12O43508 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12O43508 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.73■□□□□ 0.75
TNFSF12O43508 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12O43508 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12O43508 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12O43508 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12O43508 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TNFSF12O43508 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12O43508 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TNFSF12O43508 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12O43508 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12O43508 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12O43508 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12O43508 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12O43508 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12O43508 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12O43508 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12O43508 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF12O43508 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF12O43508 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF12O43508 ZNRF2P2-203ENST00000454624 420 ntBASIC19.71■□□□□ 0.75
TNFSF12O43508 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.71■□□□□ 0.75
TNFSF12O43508 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF12O43508 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.71■□□□□ 0.75
TNFSF12O43508 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF12O43508 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFSF12O43508 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.7■□□□□ 0.74
TNFSF12O43508 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.7■□□□□ 0.74
TNFSF12O43508 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.7■□□□□ 0.74
TNFSF12O43508 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF12O43508 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF12O43508 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFSF12O43508 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12O43508 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12O43508 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12O43508 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFSF12O43508 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFSF12O43508 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12O43508 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFSF12O43508 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12O43508 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12O43508 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12O43508 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12O43508 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12O43508 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.68■□□□□ 0.74
TNFSF12O43508 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12O43508 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFSF12O43508 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12O43508 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFSF12O43508 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12O43508 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12O43508 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12O43508 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12O43508 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12O43508 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TNFSF12O43508 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12O43508 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12O43508 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.67■□□□□ 0.74
TNFSF12O43508 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12O43508 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFSF12O43508 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.67■□□□□ 0.74
TNFSF12O43508 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF12O43508 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF12O43508 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.66■□□□□ 0.74
TNFSF12O43508 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TNFSF12O43508 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF12O43508 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFSF12O43508 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFSF12O43508 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
TNFSF12O43508 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFSF12O43508 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF12O43508 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF12O43508 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFSF12O43508 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.65■□□□□ 0.74
TNFSF12O43508 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TNFSF12O43508 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNFSF12O43508 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNFSF12O43508 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF12O43508 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF12O43508 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TNFSF12O43508 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.64■□□□□ 0.73
TNFSF12O43508 CR559946.2-201ENST00000623684 991 ntBASIC19.64■□□□□ 0.73
TNFSF12O43508 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF12O43508 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF12O43508 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF12O43508 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.64■□□□□ 0.73
TNFSF12O43508 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF12O43508 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF12O43508 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF12O43508 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFSF12O43508 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF12O43508 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
TNFSF12O43508 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF12O43508 LINC01124-201ENST00000409786 2117 ntBASIC19.63■□□□□ 0.73
TNFSF12O43508 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TNFSF12O43508 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFSF12O43508 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.63■□□□□ 0.73
TNFSF12O43508 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms