Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM43BA6NCK2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM43BA6NCK2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM43BA6NCK2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.5■■□□□ 1.83
TRIM43BA6NCK2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM43BA6NCK2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
TRIM43BA6NCK2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.49■■□□□ 1.83
TRIM43BA6NCK2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
TRIM43BA6NCK2 AL356740.2-201ENST00000601559 647 ntBASIC26.49■■□□□ 1.83
TRIM43BA6NCK2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.48■■□□□ 1.83
TRIM43BA6NCK2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM43BA6NCK2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM43BA6NCK2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM43BA6NCK2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM43BA6NCK2 ZNRF2P3-201ENST00000424200 374 ntBASIC26.48■■□□□ 1.83
TRIM43BA6NCK2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.48■■□□□ 1.83
TRIM43BA6NCK2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM43BA6NCK2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.47■■□□□ 1.83
TRIM43BA6NCK2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.47■■□□□ 1.83
TRIM43BA6NCK2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.47■■□□□ 1.83
TRIM43BA6NCK2 RARRES2P6-201ENST00000567333 442 ntBASIC26.47■■□□□ 1.83
TRIM43BA6NCK2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM43BA6NCK2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM43BA6NCK2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
TRIM43BA6NCK2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.46■■□□□ 1.83
TRIM43BA6NCK2 MTDHP2-201ENST00000601468 714 ntBASIC26.46■■□□□ 1.83
TRIM43BA6NCK2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.46■■□□□ 1.83
TRIM43BA6NCK2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM43BA6NCK2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.45■■□□□ 1.82
TRIM43BA6NCK2 AL512631.2-201ENST00000604634 923 ntBASIC26.45■■□□□ 1.82
TRIM43BA6NCK2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.45■■□□□ 1.82
TRIM43BA6NCK2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM43BA6NCK2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM43BA6NCK2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.82
TRIM43BA6NCK2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.44■■□□□ 1.82
TRIM43BA6NCK2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.44■■□□□ 1.82
TRIM43BA6NCK2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM43BA6NCK2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM43BA6NCK2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.43■■□□□ 1.82
TRIM43BA6NCK2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM43BA6NCK2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM43BA6NCK2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM43BA6NCK2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
TRIM43BA6NCK2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM43BA6NCK2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM43BA6NCK2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM43BA6NCK2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
TRIM43BA6NCK2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
TRIM43BA6NCK2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.41■■□□□ 1.82
TRIM43BA6NCK2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.41■■□□□ 1.82
TRIM43BA6NCK2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
TRIM43BA6NCK2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM43BA6NCK2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.4■■□□□ 1.82
TRIM43BA6NCK2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM43BA6NCK2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.4■■□□□ 1.82
TRIM43BA6NCK2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM43BA6NCK2 AC026271.2-201ENST00000428091 497 ntBASIC26.39■■□□□ 1.82
TRIM43BA6NCK2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.39■■□□□ 1.81
TRIM43BA6NCK2 AL449106.1-201ENST00000608517 1980 ntBASIC26.38■■□□□ 1.81
TRIM43BA6NCK2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM43BA6NCK2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.38■■□□□ 1.81
TRIM43BA6NCK2 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.38■■□□□ 1.81
TRIM43BA6NCK2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.38■■□□□ 1.81
TRIM43BA6NCK2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM43BA6NCK2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.37■■□□□ 1.81
TRIM43BA6NCK2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
TRIM43BA6NCK2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM43BA6NCK2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
TRIM43BA6NCK2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
TRIM43BA6NCK2 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.36■■□□□ 1.81
TRIM43BA6NCK2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.36■■□□□ 1.81
TRIM43BA6NCK2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
TRIM43BA6NCK2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM43BA6NCK2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM43BA6NCK2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM43BA6NCK2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM43BA6NCK2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43BA6NCK2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43BA6NCK2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43BA6NCK2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43BA6NCK2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43BA6NCK2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43BA6NCK2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43BA6NCK2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.35■■□□□ 1.81
TRIM43BA6NCK2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43BA6NCK2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.35■■□□□ 1.81
TRIM43BA6NCK2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43BA6NCK2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM43BA6NCK2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.34■■□□□ 1.81
TRIM43BA6NCK2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
TRIM43BA6NCK2 AC106739.1-201ENST00000617035 715 ntBASIC26.34■■□□□ 1.81
TRIM43BA6NCK2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM43BA6NCK2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM43BA6NCK2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
TRIM43BA6NCK2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
TRIM43BA6NCK2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM43BA6NCK2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.33■■□□□ 1.81
TRIM43BA6NCK2 PBX2P1-201ENST00000493219 1291 ntBASIC26.33■■□□□ 1.81
TRIM43BA6NCK2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.8
TRIM43BA6NCK2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms