Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV27A0A0K0K1C4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
TRBV27A0A0K0K1C4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV27A0A0K0K1C4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRBV27A0A0K0K1C4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV27A0A0K0K1C4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV27A0A0K0K1C4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV27A0A0K0K1C4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV27A0A0K0K1C4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV27A0A0K0K1C4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV27A0A0K0K1C4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV27A0A0K0K1C4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV27A0A0K0K1C4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRBV27A0A0K0K1C4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRBV27A0A0K0K1C4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV27A0A0K0K1C4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV27A0A0K0K1C4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV27A0A0K0K1C4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV27A0A0K0K1C4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV27A0A0K0K1C4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRBV27A0A0K0K1C4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV27A0A0K0K1C4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV27A0A0K0K1C4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV27A0A0K0K1C4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV27A0A0K0K1C4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRBV27A0A0K0K1C4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBV27A0A0K0K1C4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV27A0A0K0K1C4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV27A0A0K0K1C4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV27A0A0K0K1C4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV27A0A0K0K1C4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV27A0A0K0K1C4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 AC068473.5-201ENST00000616428 2072 ntBASIC16.81■□□□□ 0.28
TRBV27A0A0K0K1C4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV27A0A0K0K1C4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV27A0A0K0K1C4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV27A0A0K0K1C4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV27A0A0K0K1C4 LINC01971-201ENST00000617888 1048 ntBASIC16.8■□□□□ 0.28
TRBV27A0A0K0K1C4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV27A0A0K0K1C4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV27A0A0K0K1C4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRBV27A0A0K0K1C4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV27A0A0K0K1C4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV27A0A0K0K1C4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV27A0A0K0K1C4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV27A0A0K0K1C4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV27A0A0K0K1C4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV27A0A0K0K1C4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRBV27A0A0K0K1C4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV27A0A0K0K1C4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV27A0A0K0K1C4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV27A0A0K0K1C4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV27A0A0K0K1C4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRBV27A0A0K0K1C4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 DUX4L13-201ENST00000554103 1267 ntBASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 DUX4L15-201ENST00000611059 1267 ntBASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 DUX4L23-201ENST00000615195 1269 ntBASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 DUX4L24-201ENST00000617576 1269 ntBASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 DUX4L22-201ENST00000618238 1269 ntBASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 DUX4L20-201ENST00000619712 1269 ntBASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 DUX4L21-201ENST00000622058 1269 ntBASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 DUX4L10-201ENST00000622460 1267 ntBASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 DUX4L25-201ENST00000624915 1269 ntBASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV27A0A0K0K1C4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV27A0A0K0K1C4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.77■□□□□ 0.28
TRBV27A0A0K0K1C4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms