Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV39A0A0B4J263 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV39A0A0B4J263 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV39A0A0B4J263 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV39A0A0B4J263 AC138932.3-201ENST00000567634 1902 ntBASIC19.94■□□□□ 0.78
TRAV39A0A0B4J263 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV39A0A0B4J263 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV39A0A0B4J263 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV39A0A0B4J263 ECEL1P2-201ENST00000461596 1295 ntBASIC19.93■□□□□ 0.78
TRAV39A0A0B4J263 MIR3960-201ENST00000583311 91 ntBASIC19.93■□□□□ 0.78
TRAV39A0A0B4J263 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAV39A0A0B4J263 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV39A0A0B4J263 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV39A0A0B4J263 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV39A0A0B4J263 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.93■□□□□ 0.78
TRAV39A0A0B4J263 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV39A0A0B4J263 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV39A0A0B4J263 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
TRAV39A0A0B4J263 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV39A0A0B4J263 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV39A0A0B4J263 GPX1-201ENST00000419349 1106 ntBASIC19.92■□□□□ 0.78
TRAV39A0A0B4J263 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRAV39A0A0B4J263 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRAV39A0A0B4J263 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV39A0A0B4J263 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV39A0A0B4J263 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAV39A0A0B4J263 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAV39A0A0B4J263 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV39A0A0B4J263 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRAV39A0A0B4J263 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV39A0A0B4J263 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV39A0A0B4J263 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRAV39A0A0B4J263 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV39A0A0B4J263 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV39A0A0B4J263 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV39A0A0B4J263 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV39A0A0B4J263 AC142381.3-201ENST00000568208 1670 ntBASIC19.9■□□□□ 0.78
TRAV39A0A0B4J263 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV39A0A0B4J263 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV39A0A0B4J263 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV39A0A0B4J263 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV39A0A0B4J263 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAV39A0A0B4J263 AC093536.1-201ENST00000569153 554 ntBASIC19.89■□□□□ 0.77
TRAV39A0A0B4J263 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV39A0A0B4J263 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAV39A0A0B4J263 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRAV39A0A0B4J263 AC097639.1-201ENST00000565519 1891 ntBASIC19.88■□□□□ 0.77
TRAV39A0A0B4J263 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
TRAV39A0A0B4J263 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV39A0A0B4J263 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAV39A0A0B4J263 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV39A0A0B4J263 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV39A0A0B4J263 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV39A0A0B4J263 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV39A0A0B4J263 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV39A0A0B4J263 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV39A0A0B4J263 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV39A0A0B4J263 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
TRAV39A0A0B4J263 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV39A0A0B4J263 RP9P-202ENST00000450133 1212 ntBASIC19.87■□□□□ 0.77
TRAV39A0A0B4J263 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
TRAV39A0A0B4J263 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV39A0A0B4J263 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV39A0A0B4J263 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV39A0A0B4J263 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV39A0A0B4J263 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV39A0A0B4J263 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV39A0A0B4J263 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV39A0A0B4J263 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAV39A0A0B4J263 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRAV39A0A0B4J263 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV39A0A0B4J263 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV39A0A0B4J263 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV39A0A0B4J263 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV39A0A0B4J263 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV39A0A0B4J263 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
TRAV39A0A0B4J263 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV39A0A0B4J263 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV39A0A0B4J263 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV39A0A0B4J263 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV39A0A0B4J263 AC093323.1-202ENST00000635031 2045 ntBASIC19.85■□□□□ 0.77
TRAV39A0A0B4J263 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV39A0A0B4J263 SLC6A10P-202ENST00000431994 2058 ntBASIC19.84■□□□□ 0.77
TRAV39A0A0B4J263 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.84■□□□□ 0.77
TRAV39A0A0B4J263 AC007029.1-201ENST00000604183 313 ntBASIC19.84■□□□□ 0.77
TRAV39A0A0B4J263 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV39A0A0B4J263 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV39A0A0B4J263 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV39A0A0B4J263 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TRAV39A0A0B4J263 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV39A0A0B4J263 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV39A0A0B4J263 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV39A0A0B4J263 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV39A0A0B4J263 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV39A0A0B4J263 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.83■□□□□ 0.76
TRAV39A0A0B4J263 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV39A0A0B4J263 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRAV39A0A0B4J263 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV39A0A0B4J263 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRAV39A0A0B4J263 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms