Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRAV1-2A0A0B4J238 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
TRAV1-2A0A0B4J238 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRAV1-2A0A0B4J238 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV1-2A0A0B4J238 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TRAV1-2A0A0B4J238 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV1-2A0A0B4J238 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.78■□□□□ 0.92
TRAV1-2A0A0B4J238 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAV1-2A0A0B4J238 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV1-2A0A0B4J238 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRAV1-2A0A0B4J238 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAV1-2A0A0B4J238 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV1-2A0A0B4J238 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
TRAV1-2A0A0B4J238 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV1-2A0A0B4J238 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV1-2A0A0B4J238 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV1-2A0A0B4J238 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV1-2A0A0B4J238 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV1-2A0A0B4J238 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAV1-2A0A0B4J238 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV1-2A0A0B4J238 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV1-2A0A0B4J238 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAV1-2A0A0B4J238 AL359504.2-201ENST00000605506 1601 ntBASIC20.75■□□□□ 0.91
TRAV1-2A0A0B4J238 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV1-2A0A0B4J238 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV1-2A0A0B4J238 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV1-2A0A0B4J238 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAV1-2A0A0B4J238 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV1-2A0A0B4J238 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV1-2A0A0B4J238 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TRAV1-2A0A0B4J238 AC021231.2-201ENST00000594613 730 ntBASIC20.74■□□□□ 0.91
TRAV1-2A0A0B4J238 AC044849.2-201ENST00000606596 710 ntBASIC20.74■□□□□ 0.91
TRAV1-2A0A0B4J238 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV1-2A0A0B4J238 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV1-2A0A0B4J238 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV1-2A0A0B4J238 DUSP8P5-201ENST00000422884 1815 ntBASIC20.73■□□□□ 0.91
TRAV1-2A0A0B4J238 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAV1-2A0A0B4J238 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV1-2A0A0B4J238 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV1-2A0A0B4J238 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV1-2A0A0B4J238 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.72■□□□□ 0.91
TRAV1-2A0A0B4J238 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV1-2A0A0B4J238 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV1-2A0A0B4J238 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
TRAV1-2A0A0B4J238 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV1-2A0A0B4J238 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV1-2A0A0B4J238 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV1-2A0A0B4J238 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV1-2A0A0B4J238 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV1-2A0A0B4J238 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV1-2A0A0B4J238 AC079834.2-201ENST00000609776 1949 ntBASIC20.71■□□□□ 0.91
TRAV1-2A0A0B4J238 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRAV1-2A0A0B4J238 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAV1-2A0A0B4J238 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.91
TRAV1-2A0A0B4J238 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV1-2A0A0B4J238 MIR219A2-201ENST00000608502 1504 ntBASIC20.7■□□□□ 0.9
TRAV1-2A0A0B4J238 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.7■□□□□ 0.9
TRAV1-2A0A0B4J238 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV1-2A0A0B4J238 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV1-2A0A0B4J238 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV1-2A0A0B4J238 AC008813.1-201ENST00000536597 885 ntBASIC20.7■□□□□ 0.9
TRAV1-2A0A0B4J238 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV1-2A0A0B4J238 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRAV1-2A0A0B4J238 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV1-2A0A0B4J238 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV1-2A0A0B4J238 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV1-2A0A0B4J238 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TRAV1-2A0A0B4J238 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TRAV1-2A0A0B4J238 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV1-2A0A0B4J238 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV1-2A0A0B4J238 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV1-2A0A0B4J238 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRAV1-2A0A0B4J238 AC148477.6-201ENST00000623746 465 ntBASIC20.69■□□□□ 0.9
TRAV1-2A0A0B4J238 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV1-2A0A0B4J238 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV1-2A0A0B4J238 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAV1-2A0A0B4J238 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV1-2A0A0B4J238 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV1-2A0A0B4J238 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV1-2A0A0B4J238 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV1-2A0A0B4J238 AL359258.2-201ENST00000564063 1566 ntBASIC20.68■□□□□ 0.9
TRAV1-2A0A0B4J238 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV1-2A0A0B4J238 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV1-2A0A0B4J238 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.68■□□□□ 0.9
TRAV1-2A0A0B4J238 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAV1-2A0A0B4J238 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAV1-2A0A0B4J238 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV1-2A0A0B4J238 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.68■□□□□ 0.9
TRAV1-2A0A0B4J238 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV1-2A0A0B4J238 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV1-2A0A0B4J238 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV1-2A0A0B4J238 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRAV1-2A0A0B4J238 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAV1-2A0A0B4J238 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAV1-2A0A0B4J238 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV1-2A0A0B4J238 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TRAV1-2A0A0B4J238 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV1-2A0A0B4J238 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV1-2A0A0B4J238 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRAV1-2A0A0B4J238 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms