Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 AC004461.1-201ENST00000412461 403 ntBASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 AL136379.1-201ENST00000623471 2642 ntBASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDHGA3Q9Y5H0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 AL139400.1-201ENST00000366220 510 ntBASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 MIR770-201ENST00000390219 98 ntBASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 HLA-J-203ENST00000494367 1087 ntBASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 AC106028.4-201ENST00000614509 607 ntBASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA3Q9Y5H0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 PCDHB19P-201ENST00000570871 2371 ntBASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 UBALD1-205ENST00000590891 2641 ntBASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 AL513480.1-201ENST00000451731 511 ntBASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 AC022145.2-201ENST00000598203 171 ntBASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 AC093028.1-201ENST00000622998 982 ntBASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA3Q9Y5H0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms