Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.64■□□□□ 0.1
PCDHGA9Q9Y5G4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.64■□□□□ 0.1
PCDHGA9Q9Y5G4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHGA9Q9Y5G4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 AC107890.1-201ENST00000422478 521 ntBASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 FAM58DP-201ENST00000428076 619 ntBASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 IGHV3-62-201ENST00000520057 340 ntBASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 DUX4L17-201ENST00000557360 1267 ntBASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHGA9Q9Y5G4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 MIR943-201ENST00000401286 94 ntBASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 SPDYE7P-202ENST00000420373 878 ntBASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 GPS2P2-201ENST00000430745 888 ntBASIC15.62■□□□□ 0.09
PCDHGA9Q9Y5G4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms