Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 AC023908.3-201ENST00000564211 3047 ntBASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 AL359258.3-201ENST00000622910 2331 ntBASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 AC026748.1-201ENST00000624349 3251 ntBASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 AL353692.3-201ENST00000407031 1396 ntBASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERGIC3Q9Y282 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 RASA4DP-201ENST00000460726 1199 ntBASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERGIC3Q9Y282 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.29■□□□□ 0.04
ERGIC3Q9Y282 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms