Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 POM121L10P-201ENST00000436994 1285 ntBASIC25.92■■□□□ 1.74
RIMBP3Q9UFD9 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
RIMBP3Q9UFD9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC25.92■■□□□ 1.74
RIMBP3Q9UFD9 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC25.92■■□□□ 1.74
RIMBP3Q9UFD9 AF254983.2-201ENST00000612331 135 ntBASIC25.92■■□□□ 1.74
RIMBP3Q9UFD9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 AC008132.1-202ENST00000342005 1389 ntBASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 AL139010.1-201ENST00000454878 894 ntBASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RIMBP3Q9UFD9 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 FAM197Y7-201ENST00000432892 766 ntBASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 AC126915.1-201ENST00000522847 1038 ntBASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 LINC01451-201ENST00000623792 534 ntBASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC25.9■■□□□ 1.74
RIMBP3Q9UFD9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RIMBP3Q9UFD9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
RIMBP3Q9UFD9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC25.89■■□□□ 1.74
RIMBP3Q9UFD9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
RIMBP3Q9UFD9 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RIMBP3Q9UFD9 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC25.89■■□□□ 1.74
RIMBP3Q9UFD9 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
RIMBP3Q9UFD9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC25.89■■□□□ 1.74
RIMBP3Q9UFD9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
RIMBP3Q9UFD9 AC073352.2-201ENST00000609385 439 ntBASIC25.89■■□□□ 1.74
RIMBP3Q9UFD9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
RIMBP3Q9UFD9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC25.89■■□□□ 1.74
RIMBP3Q9UFD9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
RIMBP3Q9UFD9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC25.89■■□□□ 1.74
RIMBP3Q9UFD9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
RIMBP3Q9UFD9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC25.89■■□□□ 1.73
RIMBP3Q9UFD9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
RIMBP3Q9UFD9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC25.89■■□□□ 1.73
RIMBP3Q9UFD9 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 SLC25A1P3-201ENST00000395415 828 ntBASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 RPL13P2-201ENST00000440687 659 ntBASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 COX5BP1-201ENST00000507622 393 ntBASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 GUK1-206ENST00000366723 845 ntTSL 5 BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RIMBP3Q9UFD9 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RIMBP3Q9UFD9 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms