Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC6Q9UBN7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 DUX4L17-201ENST00000557360 1267 ntBASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC6Q9UBN7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 FAM86GP-201ENST00000448322 971 ntBASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 AL135744.1-201ENST00000565098 629 ntBASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 Z92544.3-201ENST00000624747 417 ntBASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDAC6Q9UBN7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 FAM58DP-201ENST00000428076 619 ntBASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 RARRES2P8-201ENST00000566335 367 ntBASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HDAC6Q9UBN7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms