Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 MIR940-201ENST00000401276 94 ntBASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 AC023274.1-201ENST00000418278 595 ntBASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 KRT18P58-201ENST00000527480 1120 ntBASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
BLOC1S4Q9NUP1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
BLOC1S4Q9NUP1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
BLOC1S4Q9NUP1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BLOC1S4Q9NUP1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.52■□□□□ 0.55
BLOC1S4Q9NUP1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BLOC1S4Q9NUP1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.52■□□□□ 0.55
BLOC1S4Q9NUP1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
BLOC1S4Q9NUP1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BLOC1S4Q9NUP1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 AC068137.2-201ENST00000605408 478 ntBASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.51■□□□□ 0.55
BLOC1S4Q9NUP1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 LINC01144-201ENST00000626198 1710 ntBASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 AC020765.3-201ENST00000613051 740 ntBASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 TNRC18P3-201ENST00000441896 2691 ntBASIC18.5■□□□□ 0.55
BLOC1S4Q9NUP1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms